2025 to Date

Computational design of highly signalling-active membrane receptors through solvent-mediated allosteric networks
Chen, K. Y. M.; Lai, J. K.; Rudden, L. S. P.; Wang, J.; Russell, A. M.; Conners, K.; Rutter, M. E.; Condon, B.; Tung, F.; Kodandapani, L.; Chau, B.; Zhao, X.; Benach, J.; Baker, K.; Hembre, E. J.; Barth, P.
Nature Chemistry (2025doi
 
Species differences in opsonization and phagocyte recognition of preclinical poly-2-alkyl-2-oxazoline-coated nanoparticles
Tavano, R.; Morillas-Becerril, L.; Geffner-Smith, A.; Ronzani, G.; Gervasutti, R.; Arrigoni, G.; Battisti, I.; Morbidelli, M.; Polverino de Laureto, P.; Palazzi, L.; Natale, A.; Schiavon, E.; Coin, P.; Benetti, E. M.; Romio, M.; Corzana, F.; Jiménez-Moreno, E.; Sturlese, M.; Bolcato, G.; Moro, S.; Moghimi, S. M.; Mancin, F.; Papini, E.
Nature Communications 16 (1) (20252642 doi
 
Knowledge-guided diffusion model for 3D ligand-pharmacophore mapping
Yu, Jun-Lin; Zhou, Cong; Ning, Xiang-Li; Mou, Jun; Meng, Fan-Bo; Wu, Jing-Wei; Chen, Yi-Ting; Tang, Biao-Dan; Liu, Xiang-Gen; Li, Guo-Bo
Nature Communications 16 (1) (20252269 doi
 
Discovery of selective low molecular weight interleukin-36 receptor antagonists by encoded library technologies
Velcicky, Juraj; Cremosnik, Gregor; Scheufler, Clemens; Meier, Peter; Wirth, Emmanuelle; Felber, Richard; Ramage, Paul; Schaefer, Michael; Kaiser, Christian; Lehmann, Sylvie; Kutil, Raphaela; Singeisen, Sandra; Mueller-Ristig, Dorothee; Popp, Simone; Cebe, Regis; Lehr, Philipp; Kaupmann, Klemens; Erbel, Paulus; Röhn, Till A.; Giovannoni, Jerome; Dumelin, Christoph E.; Martiny-Baron, Georg
Nature Communications 16 (1) (20251669 doi
 
Macrocycle-based PROTACs selectively degrade cyclophilin A and inhibit HIV-1 and HCV
Newton, Lydia S.; Gathmann, Clara; Ridewood, Sophie; Smith, Robert J.; Wijaya, Andre J.; Hornsby, Thomas W.; Morling, Kate L.; Annett, Dara; Chiozzi, Riccardo Zenezini; Reuschl, Ann-Kathrin; Govasli, Morten L.; Tan, Ying Ying; Thorne, Lucy G.; Jolly, Clare; Thalassinos, Konstantinos; Ciulli, Alessio; Towers, Greg J.; Selwood, David L.
Nature Communications 16 (1) (20251484 doi
 
Lipoic acid-boronophenylalanine-derived multifunctional vesicles for cancer chemoradiotherapy
Dai, Liqun; Liu, Jie; Yang, Tingyu; Yu, Xiaorui; Lu, Yi; Pan, Lili; Zhou, Siming; Shu, Diyun; Liu, Yuanhao; Mao, Wuyu; Qian, Zhiyong
Nature Communications 16 (1) (20251329 doi
 
Targeting chromosomally unstable tumors with a selective KIF18A inhibitor
Phillips, Aaron F.; Zhang, Rumin; Jaffe, Mia; Schulz, Ryan; Carty, Marysol Chu; Verma, Akanksha; Feinberg, Tamar Y.; Arensman, Michael D.; Chiu, Alan; Letso, Reka; Bosco, Nazario; Queen, Katelyn A.; Racela, Allison R.; Stumpff, Jason; Andreu-Agullo, Celia; Bettigole, Sarah E.; Depetris, Rafael S.; Drutman, Scott; Su, Shinsan M.; Cogan, Derek A.; Eng, Christina H.
Nature Communications 16 (1) (2025307 doi
 
Characterization and structural analysis of a versatile aromatic prenyltransferase for imidazole-containing diketopiperazines
Wang, Wenxue; Wang, Peng; Ma, Chuanteng; Li, Kang; Wang, Zian; Liu, Yuting; Wang, Lu; Zhang, Guojian; Che, Qian; Zhu, Tianjiao; Zhang, Yuzhong; Li, Dehai
Nature Communications 16 (1) (2025144 doi
 
Microbiota-derived succinate promotes enterohaemorrhagic Escherichia coli virulence via lysine succinylation
Li, Linxing; Liu, Yutao; Liu, Dan; Wang, Jing; Wang, Min; Xiang, Binbin; Qin, Jingliang; Yao, Ting; Li, Wanwu; Wu, Pan; Wang, Qian; Zhang, Jianji; Xu, Yanli; Liu, Miaomiao; Wang, Yanling; Ma, Guozhen; Liu, Ruiying; Li, Xiaoya; Huai, Zimeng; Huang, Yu; Guo, Han; Yang, Bin; Feng, Lu; Huang, Di; Zhang, Kai; Wang, Lei; Liu, Bin
Nature Microbiology (2025doi
 
Discovery of the 2,3-Dihydrobenzopyrane-4-one as a Potent FTO Inhibitor against Obesity-Related Metabolic Diseases
Ma, Duo; Liu, Xianan; Zhang, Xingxing; Hong, Yaling; Wang, Yumeng; Zhang, Famin; Du, Leran; Zhao, Junjie; Wang, Quan; Chang, Cui; Liu, Wenhu; Lou, Yan; Liu, Xinhua
Journal of Medicinal Chemistry (2025doi
 
Discovery of Potent and Balanced Dual RIPK2 and 3 Inhibitors as a New Strategy for the Treatment of Inflammatory Bowel Diseases
Ma, Duo; Hu, Shuang; Wang, Chun; Ai, Jiaxin; Ma, Jiahai; Gao, Tianwen; Hong, Yaling; Wu, Zhengxing; Gu, Mingzhen; Tang, XiaoXin; Chang, YanTai; Chen, QiHang; Chen, Shuo; Yu, Qing; Yang, JunJie; Zhang, Chen; Li, Chong; Liu, Xuesong; Shi, Jingbo; Liu, Xinhua; Liu, Yuhai; Liu, Mingming
Journal of Medicinal Chemistry (2025doi
 
Discovery of Novel SIK2/3 Inhibitors for the Potential Treatment of MEF2C+ Acute Myeloid Leukemia (AML)
Zhu, Wei; Zhao, Pei; Liu, Tingting; Gao, Feng; Li, Qi; Cai, Xin; Zhang, Man; Aliper, Alex; Ren, Feng; Zhavoronkov, Alex; Ding, Xiao
Journal of Medicinal Chemistry (2025doi
 
Discovery of a Pyrazolopyridinone-Based MYC Inhibitor That Selectively Engages Intracellular c-MYC and Disrupts MYC–MAX Heterodimerization
Obisesan, Oluwatosin A.; Ofori, Samuel; Orobator, Owamagbe N.; Sharma, Himanshi; Groetecke, Emma; Awuah, Samuel G.
Journal of Medicinal Chemistry (2025doi
 
Design, Synthesis, and Biological Activity of Novel Ornithine Decarboxylase (ODC) Inhibitors
Schultz, Chad R.; Aleiwi, Bilal; Zhou, X. Edward; Suino-Powell, Kelly; Melcher, Karsten; Almeida, Nuno M. S.; Wilson, Angela K.; Ellsworth, Edmund L.; Bachmann, André S.
Journal of Medicinal Chemistry (2025doi
 
Structural Optimization of Covalent Inhibitors for Deubiquitinase ChlaDUB1 of Chlamydia trachomatis as Antibiotic Agents
Zimmermann, Thomas; Feng, Jiachen; Fischer, Simon; de Campos, Luana Janaína; Pinheiro, Felipe Ramos; Sotriffer, Christoph; Conda-Sheridan, Martin; Decker, Michael
Journal of Medicinal Chemistry (2025doi
 
Discovery of Novel Isoxazole-Based Small-Molecule Toll-Like Receptor 8 Antagonists
Matziol, Troy; Talagayev, Valerij; Slokan, Tjaša; Strašek Benedik, Nika; Holze, Janine; Sova, Matej; Wolber, Gerhard; Weindl, Günther
Journal of Medicinal Chemistry (2025doi
 
Design, Synthesis, and Biological Evaluation of Novel Orally Available Covalent CDK12/13 Dual Inhibitors for the Treatment of Tumors
Lu, Hongfu; Sun, Deheng; Wang, Zhen; Cui, Hui; Min, Lihua; Zhang, Haoyu; Zhang, Yihong; Wu, Jianping; Cai, Xin; Ding, Xiao; Zhang, Man; Aliper, Alex; Ren, Feng; Zhavoronkov, Alex
Journal of Medicinal Chemistry (2025doi
 
Discovery of Pyrrolopyrazine Carboxamide Derivatives as Potent and Selective FGFR2/3 Inhibitors that Overcome Mutant Resistance
Wang, Yazhou; Zhang, Yihong; Liu, Jinxin; Zhao, Jichen; Wang, Chao; Meng, Fanye; Cai, Xin; Zhang, Man; Aliper, Alex; Liang, Tao; Yan, Feng; Ren, Feng; Lan, Jiong; Lu, Qiang; Zhou, Fusheng; Zhavoronkov, Alex; Ding, Xiao
Journal of Medicinal Chemistry (2025doi
 
Discovery of Novel Spirocyclic MAT2A Inhibitors Demonstrating High In Vivo Efficacy in MTAP-Null Xenograft Models
Yang, Sai; Gu, Xiaowen; Chen, Lei; Zhu, Weixing
Journal of Medicinal Chemistry (2025doi
 
Discovery of Potent, Highly Selective, and Orally Bioavailable MTA Cooperative PRMT5 Inhibitors with Robust In Vivo Antitumor Activity
Zhang, Meng; Ding, Xiaoyu; Cao, Zhongying; Yang, Yilin; Ding, Xiao; Cai, Xin; Zhang, Man; Aliper, Alex; Ren, Feng; Lu, Hongfu; Zhavoronkov, Alex
Journal of Medicinal Chemistry (2025doi
 
Discovery of 2(1H)-Quinoxalinone Derivatives as Potent and Selective MAT2A Inhibitors for the Treatment of MTAP-Deficient Cancers
Li, Chunzheng; Lan, Xiaojing; Li, Xinge; Fu, Yixian; Gui, Gang; Li, Xiaodong; Shen, Yanyan; Gan, Zhenjie; Huang, Min; Zha, Xiaoming
Journal of Medicinal Chemistry (2025doi
 
Examining Arginase-1 Trimerization Uncovers a Promising Allosteric Site for Inhibition
Dechenne, Juhans; Wierzbicka, Magdalena; Krimou, Reda; El Aakchioui, Asia; Malo Pueyo, Julia; Messens, Joris; Fillet, Marianne; Spillier, Quentin; Frédérick, Raphaël
Journal of Medicinal Chemistry (2025doi
 
Structure-based design, synthesis and biological evaluation of a novel d-amino acid-containing peptide inhibitor by blocking the RAD51-BRCA2 interaction for the treatment of kidney cancer
Wang, Jianjun; Guan, Lixia; Wang, Jun; Yin, Shengnan; Gao, Junyi; Zhang, Yan; Niu, Miao-Miao; Li, Jindong; Li, Ying
European Journal of Medicinal Chemistry 287 (2025117372 doi
 
Design, synthesis, and biological evaluation of novel and highly potent peptides targeting syntenin
Zhou, Yang; Wang, Yuting; Liu, Juanjuan; Bai, Yu; Ma, Jinliang; Niu, Miao-Miao; Li, Jindong; Jiang, Haijing
European Journal of Medicinal Chemistry (2025117446 doi
 
Design, synthesis, and biological evaluation of new tetrahydropyrimidine derivatives as multitarget anti-inflammatory agents
Ali, Ahmed R.; Al-Kubeisi, Ahmed K.; Elwakil, Bassma H.; Darwish, Amira Abd-Elfattah; Almutairi, Tahani M.; Elshatanofy, Maram M.; Alshargabi, Tareq Q.; El Sawy, Maged A.
European Journal of Medicinal Chemistry Reports 13 (2025100259 doi
 
Discovery of 1-phenyl-1,2,3-triazole ureas as dual VEGFR-2/JNK-1 type II kinase inhibitors targeting pancreatic cancer
Eldehna, Wagdy M.; Roshdy, Eslam; Abdulla, Maha-Hamadien; Zain-Alabdeen, Abdelrahman I.; Shaldam, Moataz A.; Alhassan, Noura S.; Traiki, Thamer Bin; Al-Sanea, Mohammad M.; El-Hamaky, Anwar A.; Al-Karmalawy, Ahmed A.; El Kerdawy, Ahmed M.; Abe, Manabu; Tawfik, Haytham O.
International Journal of Biological Macromolecules 308 (2025142372 doi
 
Molecular simulations guiding recombinant mussel protein with enhanced applicable properties for adhesive materials
Xue, Rui; Zhang, Meng; Zhang, Chuanxi; Zhang, John Z. H.; Xu, Hong; Wang, Rui; Zhang, Lujia; Li, Sha
International Journal of Biological Macromolecules 307 (2025141988 doi
 
Enhancing catalytic efficiency of two microbial uricases making by directed evolution
Tang, Xiaoyuan; Qin, Liling; Xia, Yuze; Ju, Dianwen; Hu, Haifeng
International Journal of Biological Macromolecules 301 (2025140485 doi
 
New mechanistic insights on transferrin synthesis inhibition and release of bound iron mediated by lead loaded ultrafine carbon black
Li, Xiangxiang; Wang, Jinhu; Hu, Shaoyang; Chu, Shanshan; Wang, Xiaoyang; Zong, Wansong; Liu, Rutao
International Journal of Biological Macromolecules (2025141780 doi
 
Insights into the catalytic mechanism of archaeal peptidoglycan endoisopeptidases from methanogenic phages
Guo, Leizhou; Zhu, Yibo; Zhao, Ninglin; Leng, Huan; Wang, Shuxin; Yang, Qing; Zhao, Pengyan; Chen, Yi; Cha, Guihong; Bai, Liping; Bao, Rui
International Journal of Biological Macromolecules 296 (2025139672 doi
 
Key site residues of Cnaphalocrocis medinalis odorant-binding protein 13 CmedOBP13 involved in interacting with rice plant volatiles
Duan, Shuang-Gang; Mao, Ling; Sun, Shuang-Feng; Chen, Ru-Di; Taha Abdelkhalek, Sara; Wang, Man-Qun
International Journal of Biological Macromolecules 290 (2025139007 doi
 
Structural insights into fungal and human topoisomerase II with implications for in silico antifungal drug design
Sappati, Subrahmanyam; Kondaka, Kavya; Gabriel, Iwona; Baginski, Maciej
Scientific Reports 15 (1) (20259467 doi
 
Exploring mitochondrial and ferroptotic mechanisms for systemic lupus erythematosus biomarker identification and therapy
Dai, Yunfeng; Liu, Jianwen; Lai, Yongxing; Gao, Fei; Lin, He; Zhang, Li; Chen, Zhihan
Scientific Reports 15 (1) (20259140 doi
 
1, 4-benzodioxan-substituted Thienyl chalcone derivatives as novel reversible inhibitors of human monoamine oxidase B with anti-neuroinflammatory activity
Sun, Demeng; Mu, Mengxue; Jiang, Yanmei; Wang, Bo; Kong, Zuo; Tan, Jingbo; Hu, Yun
Scientific Reports 15 (1) (20258690 doi
 
Receptor mechanism producing a sweet taste from plant aroma compounds
Horie, Fuyumi; Sanematsu, Keisuke; Yasumatsu, Keiko; Hirokawa, Takatsugu; Shigemura, Noriatsu; Yamashita, Atsuko; Kusakabe, Yuko
Scientific Reports 15 (1) (20256795 doi
 
Molecular mechanism of type ib MET inhibitors and their potential for CNS tumors
Liu, Zhenhao; Liu, Wenlang; Shen, Xinyi; Jiang, Tao; Li, Xionghao; Liu, Hao; Zheng, Zheng
Scientific Reports 15 (1) (20256926 doi
 
Application of in-silico docking for green electrochemical quantification of prucalopride succinate in pharmaceutical, urine, and milk matrices
Mohamed, Ahmed R.; Sayed, Rania A.; Shalaby, Abdalla; Ibrahim, Hany
Scientific Reports 15 (1) (20255895 doi
 
9-aminominocycline potentiates the efficacy of EIDD-1931 and PF-332 by targeting the papain like protease enzyme of SARS-CoV-2
Pandey, Kabita; Lewis, Devin Shane M.; Heo, Kyeongin; Acharya, Arpan; Fields, Travis; Gowda, Kritika; Dean, George; Rayalam, Srujana; Byrareddy, Siddappa N.; Mody, Vicky; Taval, Shashidharamurthy
Scientific Reports 15 (1) (20255671 doi
 
Martini compatible coarse-grained model of polyethylenimine for pulmonary gene delivery
Lunt, Graham; Hashemi, Niloofar; Mahajan, Subhamoy; Tang, Tian
Scientific Reports 15 (1) (20254377 doi
 
Development of detection system for lead ions in mixture solutions using UV-Vis measurements with peptide immobilized microbeads
Yoshida, Shuhei; Yoshida, Koki; Hamada, Yoshio; Tsuruoka, Takaaki; Usui, Kenji
Scientific Reports 15 (1) (20253249 doi
 
Evaluation of hesperidin as a potential larvicide against Culex pipiens with computational prediction of its mode of action via molecular docking
Haikal, Abdullah; Kamal, Mahmoud; Hosni, Eslam M.; Amen, Yhiya
Scientific Reports 15 (1) (20252677 doi
 
Integrating machine learning and structure-based approaches for repurposing potent tyrosine protein kinase Src inhibitors to treat inflammatory disorders
Iqbal, Muhammad Waleed; Shahab, Muhammad; ullah, Zakir; Zheng, Guojun; Anjum, Irfan; Shazly, Gamal A.; Mengistie, Atrsaw Asrat; Sun, Xinxiao; Yuan, Qipeng
Scientific Reports 15 (1) (20251836 doi
 
Synthesis, in vitro and in-silico evaluation of amide derivatives as prospective antimicrobial and antileishmanial agents
Rashid, Haroon Ur; Wali, Khan Sher; Abdul, Latif; Saira, Nayab; Naveed, Umar Muhammad; Fatima, Sana; Bari, Shah Abdul; Muhammad, Zahoor; Riaz, Ullah; & Ali, Essam A.
Future Medicinal Chemistry (20251-14 doi
 
Integrated Virtual Screening Approach Identifies New CYP19A1 Inhibitors
Liu, Sijie; Wu, Jie; Chen, Ya; Wolf, Clemens Alexander; Bureik, Matthias; Kirchmair, Johannes; Marchisio, Mario Andrea; Wolber, Gerhard
Journal of Chemical Information and Modeling (2025doi
 
Understanding Conformation Importance in Data-Driven Property Prediction Models
Hamakawa, Yu; Miyao, Tomoyuki
Journal of Chemical Information and Modeling (2025doi
 
OpenMMDL
Talagayev, Valerij; Chen, Yu; Doering, Niklas Piet; Obendorf, Leon; Denzinger, Katrin; Puls, Kristina; Lam, Kevin; Liu, Sijie; Wolf, Clemens Alexander; Noonan, Theresa; Breznik, Marko; Knaus, Petra; Wolber, Gerhard
Journal of Chemical Information and Modeling (2025doi
 
Mechanism of Regio- and Enantioselective Hydroxylation of Arachidonic Acid Catalyzed by Human CYP2E1: A Combined Molecular Dynamics and Quantum Mechanics/Molecular Mechanics Study
Zhang, Honghui; Hirao, Hajime
Journal of Chemical Information and Modeling (2025doi
 
Impact of Varying Velocities and Solvation Boxes on Alchemical Free-Energy Simulations
Wang, Meiting; Jiang, Hao; Ryde, Ulf
Journal of Chemical Information and Modeling (2025doi
 
Thermal Titration Molecular Dynamics: The Revenge of the Fragments
Pavan, Matteo; Menin, Silvia; Dodaro, Andrea; Novello, Gianluca; Cavastracci Strascia, Chiara; Sturlese, Mattia; Salmaso, Veronica; Moro, Stefano
Journal of Chemical Information and Modeling (2025doi
 
Rationalizing Predictions of Isoform-Selective Phosphoinositide 3-Kinase Inhibitors Using MolAnchor Analysis
Lamens, Alec; Bajorath, Jürgen
Journal of Chemical Information and Modeling (2025doi
 
Post-Docking Refinement of Peptide or Protein-RNA Complexes Using Thermal Titration Molecular Dynamics (TTMD): A Stability Insight
Dodaro, Andrea; Novello, Gianluca; Menin, Silvia; Cavastracci Strascia, Chiara; Sturlese, Mattia; Salmaso, Veronica; Moro, Stefano
Journal of Chemical Information and Modeling (2025doi
 
PPDock: Pocket Prediction-Based Protein–Ligand Blind Docking
Du, Jie; Yuan, Mingzhi; Shen, Ao; Wang, Manning
Journal of Chemical Information and Modeling (2025doi
 
Prediction of Proteolysis-Targeting Chimeras Retention Time Using XGBoost Model Incorporated with Chromatographic Conditions
Qu, Xinhao; Jiang, Chen; Shan, Mengyi; Ke, Wenhao; Chen, Jing; Zhao, Qiming; Hu, Youhong; Liu, Jia; Qin, Lu-Ping; Cheng, Gang
Journal of Chemical Information and Modeling (2025doi
 
CovCysPredictor: Predicting Selective Covalently Modifiable Cysteines Using Protein Structure and Interpretable Machine Learning
Reimer, Bryn Marie; Awoonor-Williams, Ernest; Golosov, Andrei A.; Hornak, Viktor
Journal of Chemical Information and Modeling (2025doi
 
In silico screening and synthesis of stable tilmicosin-hydrazone derivatives as potential DNA disruptors towards Staphylococcus aureus
Zhang, Jia-Yin; Cao, Meng-Nan; Hou, Ting; Li, Bing-Yan; Gu, Chang-Chun; Han, Zhen-Yu; Yu, Ri-Lei; Xia, Ya-Mu; Gao, Wei-Wei
Bioorganic Chemistry (2025108336 doi
 
Molecular simulations guided drugs repurposing to inhibit human GPx1 enzyme for cancer therapy
Iqbal, Muhammad Waleed; Haider, Syed Zeeshan; Nawaz, Muhammad Zohaib; Irfan, Muhammad; Al-Ghanim, Khalid A.; Sun, Xinxiao; Yuan, Qipeng
Bioorganic Chemistry (2025108279 doi
 
Dimethylallylated stilbenoids by chemo-selective prenyltransferases and their α-glucosidase inhibitory effects
Yang, Min; Jin, Jun; Yi, Jiale; Yu, Xia; Yuan, Chun-Mao; Zhou, Kang
Bioorganic Chemistry (2025108261 doi
 
From closed to open: three dynamic states of membrane-bound cytochrome P450 3A4
Spanke, Vera A.; Egger-Hoerschinger, Valentin J.; Ruzsanyi, Veronika; Liedl, Klaus R.
Journal of Computer-Aided Molecular Design 39 (1) (202512 doi
 
Quinoline ATP Synthase Inhibitors with Activity Against Multidrug Resistant Acinetobacter baumannii and Pseudomonas aeruginosa
Ward, Katie T.; Williams, Alexander P. L.; Dennison, Angelina L.; Aamir, Lena; Allen, Darien L.; Chavez-Arellano, Britza; Marchlewski, Toni A.; Zappia, Mars L.; Wolfe, Amanda L.; Steed, P. Ryan
ChemMedChem n/a (n/a) (2025e202400952 doi
 
Exploring cotton plant compounds for novel treatments against brain-eating Naegleria fowleri: An In-silico approach
Zaman, Aqal; Noor, Sana; Ahmad, Iqra; Shehroz, Muhammad; Alhajri, Nour; Ahmed, Sibtain; Nishan, Umar; Sheheryar, Sheheryar; Ullah, Riaz; Shahat, Abdelaaty A.; Dib, Hanna; Shah, Mohibullah
PLOS ONE 20 (2) (2025e0319032 doi
 
Molecular dynamics simulation based prediction of T-cell epitopes for the production of effector molecules for liver cancer immunotherapy
Zafar, Sidra; Bai, Yuhe; Muhammad, Syed Aun; Guo, Jinlei; Khurram, Haris; Zafar, Saba; Muqaddas, Iraj; Shaikh, Rehan Sadiq; Bai, Baogang
PLOS ONE 20 (1) (2025e0309049 doi
 
Development and comparison of single FLT3-inhibitors to dual FLT3/TAF1-inhibitors as an anti-leukemic approach
Leigh, Robert S.; Kaynak, Bogac L.; Ruskoaho, Heikki; Välimäki, Mika J.
PLOS ONE 20 (3) (2025e0320443 doi
 
In Silico Functional Annotation and Structural Characterization of Hypothetical Proteins in Bacillus paralicheniformis and Bacillus subtilis Isolated from Honey
Bin Hafeez, Ahmer; Sappati, Subrahmanyam; Krzemieniecki, Radoslaw; Worobo, Randy; Szweda, Piotr
ACS Omega (2025doi
 
Uncovering the Binding Mechanism of Mutated Omicron Variants via Computational Strategies
Haider, Sajjad; Ahmad, Nadeem; Shafiq, Muhammad; Siddiqui, Ali Raza; Nur-e-Alam, Mohammad; Ahmed, Aftab; Ul-Haq, Zaheer
ACS Omega (2025doi
 
Biginelli dihydropyrimidines and their acetylated derivatives as L-/T-type calcium channel blockers: Synthesis, enantioseparation, and molecular modeling studies
Gündüz, Miyase Gözde; Dengiz, Cagatay; Denzinger, Katrin; Huang, Sun; Lee, J. T.; Nafie, Jordan W.; Armstrong, Daniel W.; Wolber, Gerhard; Zamponi, Gerald W.
Archiv der Pharmazie 358 (3) (2025e2400584 doi
 
Pyrazole-pyridine-carbohydrazone hybrids as promising antioxidants: synthesis, characterization, DFT, ADME, and molecular docking studies on cyclooxygenase-2
El-Zawawy, Reham O.; Omar, Alaa Z.; El-Atawy, Mohamed A.; Alharbi, Hussam Y.; Aljohani, Majed S.; Ahmad, Mohammad; Elhag, Mohammed
Journal of Molecular Structure 1337 (2025142201 doi
 
Synthesis, spectroscopic, characterization, X-ray single crystal, DNA interaction, DFT and molecular docking studies of a new Schiff base ligand derived from 1-((2-hydroxy-2-phenylethylimino)methyl)naphthalen-2-ol, and some transition metal; Mn(II), Fe(II), Co(II), Ni(II), Cu(II), and Pd(II) complexes
Elantabli, Fatma M.; El-Medani, Samir M.; Al-Anazi, Abdulaziz; Shehata, Mohamed R.; Haukka, Matti; Mohamed, Rania G.
Journal of Molecular Structure 1330 (2025141511 doi
 
Pyrazolopyrimidine fused Thiazolidinone Hybrids as CDK2 Inhibitors: Insights from Pharmacophore Modeling, Docking, DFT and Molecular Dynamics Simulations
Chagaleti, Bharath Kumar; Saravanan, Venkatesan; Oubella, Ali; Alotaibi, Saad H.; Altharawi, Ali; Mk, Kathiravan
Journal of Molecular Structure (2025142009 doi
 
Streptonaps A-C, three naphthalenones from a deep-soil derived Streptomyces netropsis GZWMJZ-1323, and their cytotoxicity
Shao, Hai; Wang, Dongyang; Xu, Yanchao; Chen, Yunshuang; Wu, Dan; He, Wenwen; Zuo, Mingxing; Zhu, Weiming; Wang, Liping
Journal of Molecular Structure (2025141803 doi
 
Synthesis, molecular modeling, DFT studies, and enantioseparation of tetrahydro-4H-chromene derivatives with calcium channel blocking activity
Koçak Aslan, Ebru; Karagüzel, Ayşe; Lam, Kevin; Dengiz, Cagatay; Huang, Sun; Burk, Ryan J.; Salehi, Reza; Sajeevan J, Siddharth Jaya; Zamponi, Gerald W.; Wolber, Gerhard; Armstrong, Daniel W.; Gündüz, Miyase Gözde
Journal of Molecular Structure (2025141457 doi
 
Virtual screening and binding mechanism of allosteric inhibitors based on SHP2E76A
Yuan, Fanru; Chen, MengGuo; Liu, Shaohui; Ma, NanNan; Du, Jiangfeng; Liu, Hongmin; Guo, Yong; Yang, Longhua
Journal of Molecular Structure (2025141429 doi
 
Efficiency of QM/MM optimization and fragment molecular orbital calculations for investigating interactions between zinc metalloprotease and its inhibitors
Sabishiro, Haruna; Nagura, Yoshinobu; Chimura, Nagomi; Yuguchi, Masayuki; Nakatani, Chisato; Takenaka, Shuta; Sugizaki, Himena; Kurita, Noriyuki
Journal of Molecular Graphics and Modelling (2025108977 doi
 
In Silico and Experimental Evidence for the Stabilization of rhEPO by Glycine, Glutamic Acid and Lysine
Alarcón-López, Yoshio Aldo; Aguirre-Vidal, Pablo; Vásquez-Valadez, Hugo Víctor; Hernández-Serda, Alejandro Manuel; Cárdenas-Granados, Alfonso Luis; Espinosa de la Garza, Carlos E.; Pérez, Néstor O.; Angeles, Enrique; Martínez, Víctor Pérez Medina
AAPS PharmSciTech 26 (1) (202521 doi
 
Supramolecular Combination Chemotherapy: Directly Inducing Immunogenic Cell Death To Inhibit Tumor Metastasis via Host–Guest Interactions
Liu, Qinye; Sun, Xueting; Wang, Yuanpeng; Chen, Yueyue
ACS Applied Materials & Interfaces (2025doi
 
Stereo- and Regioselective Metabolism of the Omeprazole Enantiomers by CYP2C19: Insights from Binding Free Energy and QM/MM Calculations in a Curtin–Hammett Framework
Xia, Songyan; Hirao, Hajime
ACS Catalysis (20253284-3294 doi
 
Discovery of Dual ROCK1/2 Inhibitors from Nocardiopsis sp. under Metal Stress
Bui, Thinh T. M.; Ko, Hyejin; Um, Soohyun; Jeong, Hyeongju; Kang, Suk Woo; Kim, Hasun; Song, Dae-geun; Jung, Sang Hoon; Moon, Kyuho
ACS Chemical Biology (2025doi
 
Chemoproteomic Profiling of Clickable Fumarate Probes for Target Identification and Mechanism of Action Studies
Zhang, Lu; Martin, Jeffrey G.; Gao, Benbo; Zeng, Weike; Couvertier, Shalise; Johnson, Douglas S.
ACS Chemical Biology (2025doi
 
Exploring the Potential of Indole-3-acetic Acid Arylhydrazone Hybrids for Parkinson’s Disease Treatment: A Comprehensive Evaluation of Neuroprotective, MAOB Inhibitory, and Antioxidant Properties
Anastassova, Neda; Kondeva-Burdina, Magdalena; Hristova-Avakumova, Nadya; Stefanova, Denitsa; Rangelov, Miroslav; Todorova, Nadezhda; Yancheva, Denitsa
ACS Chemical Neuroscience (2025doi
 
Monoamine Oxidase Inhibitors Present in Tobacco Modulate Dopamine Balance Via the Dopamine Transporter
Saro, Gabriella; Johne, Stephanie; Latino, Diogo A. R. S.; Moine, Fabian; van der Toorn, Marco; Mathis, Carole; Veljkovic, Emilija
ACS Chemical Neuroscience (2025doi
 
Differential Effects of Aβ Peptides on the Plasmin-Dependent Degradation of ApoE3 and ApoE4
Kemeh, Merc M.; Furnelli, Anthony J.; Lazo, Noel D.
ACS Chemical Neuroscience (2025doi
 
Quantum Mechanics-Based Ranking of Predicted Proteolysis Targeting Chimeras-Mediated Ternary Complexes
Monteleone, Stefania; Morao, Inaki; Fedorov, Dmitri G.; Kellici, Tahsin F.
ACS Medicinal Chemistry Letters (2025doi
 
Novel Cyclohexyl Amido Acid Antagonists of Lysophosphatidic Acid Type 1 Receptor for the Treatment of Pulmonary Fibrosis
Giuliani, Marta; Rizzi, Andrea; Pagano, Mafalda; Raveglia, Luca F.; Saccani, Francesca; Di Lascia, Maria Rosaria; Interlandi, Margherita; Nardella, Tonia Simona; Marchini, Gessica; Murgo, Annalisa; Tigli, Laura; Pappani, Alice; Capelli, Anna Maria; Fernandez, Sergio Xanxo; Puccini, Paola; Villetti, Gino; Civelli, Maurizio; Beato, Claudia; Moro, Elisa; Mundi, Claudia; Remelli, Rosaria; Armani, Elisabetta
ACS Medicinal Chemistry Letters (2025doi
 
A High-Throughput Cell-Free Enzyme Screening System Using Redox-Responsive Hydrogel Beads as Artificial Compartments
Koga, Taisei; Okawa, Yui; Ito, Tomoyuki; Orita, Kensei; Minamihata, Kosuke; Umetsu, Mitsuo; Kamiya, Noriho
ACS Synthetic Biology (2025doi
 
HACD2 Promotes Pancreatic Cancer Progression by Enhancing PKM2 Dissociation From PRKN in a Dehydratase-Independent Manner
Chu, Xuanning; Zhao, Jinyu; Shen, Yuting; Feng, Qi; Zhou, Changlin; Ma, Lingman; Zhou, Yiran
Advanced Science n/a (n/a) (20252407942 doi
 
Toluene Toxicity in the Brain: From Cellular Targets to Molecular Mechanisms
Shaw, Andrew A.; Steketee, Jeffery D.; Bukiya, Anna N.; Dopico, Alex M.
Annual Review of Pharmacology and Toxicology 65 (Volume 65, 2025) (2025487-506 doi
 
“Insights in the RSV L polymerase function and structure”
Bonneux, Brecht; Ceconi, Martina; Stobbelaar, Kim; Herschke, Florence; Delputte, Peter
Antiviral Research (2025106148 doi
 
Targeted Colon Cancer and Chemotherapeutic Through Metal Glycoconjugates: Design, Synthesis, Molecular Docking, and DFT Investigations
Al-Otaibi, Waad A; Al Motwaa, Sahar M; Abubakr, Amrajaa S; Hassan, Safaa S; Rashidi, Fatma B
Applied Organometallic Chemistry 39 (3) (2025e70000 doi
 
Versatile New Lanthanide Complexes Containing Organic Ligand Derived From Vitamin B6 as Potential Tyrosinase Inhibitors: Synthesis, Characterizations, and Structure Activity Investigations
Karim, Amir; Ullah, Saeed; Halim, Sobia Ahsan; Ali, Wajid; Khan, Ajmal; Al-Harrasi, Ahmed; Anwar, Muhammad U
Applied Organometallic Chemistry 39 (3) (2025e70024 doi
 
New Mononuclear Metal Complexes Based on 3-Acetyl-4-Hydroxy Coumarin as Potential Antitumor Agents: Full Structural Elucidation, Theoretical Calculations, and Biological Activity Studies
Fouad, R.; Saif, M.; Mashaly, Mahmoud M; Zekrallah, M.
Applied Organometallic Chemistry 39 (1) (2025e7924 doi
 
Design, synthesis of N-thianyl indole acetamide derivatives as potential plant growth regulator
Lei, Li; Tang, Xu; Sun, Wei; Liao, Anjing; Wu, Jian
Arabian Journal of Chemistry 18 (1) (2025106082 doi
 
Hybrid approach for drug-target interaction predictions in ischemic stroke models
Peng, Jing-Jie; Zhang, Yi-Yue; Li, Rui-Feng; Zhu, Wen-Jun; Liu, Hong-Rui; Li, Hui-Yin; Liu, Bin; Cao, Dong-Sheng; Peng, Jun; Luo, Xiu-Ju
Artificial Intelligence in Medicine 161 (2025103067 doi
 
Identification of Epinastine as CD96/PVR inhibitor for cancer immunotherapy
Zhang, Xiangrui; Zhang, Lihan; Li, Beibei; Wang, Qingchao; Chen, Peixin; Shi, Ranran; Zhou, Xiuman; Niu, Xiaoshuang; Zhai, Wenjie; Wu, Yahong; Shen, Wenhui; Zhou, Xiaowen; Zhao, Wenshan
BMC Biology 23 (1) (202527 doi
 
Novel 5,6-dichlorobenzimidazole derivatives as dual BRAFWT and BRAFV600E inhibitors: design, synthesis, anti-cancer activity and molecular dynamics simulations
Temirak, Ahmed; El Kerdawy, Ahmed M.; Nageeb, Amira M.; Abdel-Mohsen, Heba T.
BMC Chemistry 19 (1) (202545 doi
 
Efficacy and Molecular Docking Study of Main Constituents of Murraya paniculata Biomass Extract Against Helicobacter pylori
Mohamed, Marwa Yousry A.; Al-Rajhi, Aisha M. H.; Hamed, Seham M.; Masmali, Ibrahim; Hamza, HananTaher; Kiki, Manal J.; Alharbi, Asmaa A.
BioResources 20 (2) (20253299-3314 doi
 
Eupalinolide B alleviates corticosterone-induced PC12 cell injury and improves depression-like behaviors in CUMS rats by regulating the GSK-3β/β-catenin pathway
Wang, Tian-tian; Zhou, Meng-yuan; Gong, Xue-na; Huang, Yan; Li, Fei-long; Gu, Sheng-long; Zhang, Man-yu; Li, Ling-ling; Xu, Ze-shan; Li, Rong; Cai, Li
Biochemical Pharmacology 235 (2025116831 doi
 
Novel dog hepatic cytochrome P450 3A293 oxidizes endogenous testosterone and estradiol
Uno, Yasuhiro; Ushirozako, Genki; Murayama, Norie; Yamazaki, Hiroshi
Biochemical Pharmacology (2025116846 doi
 
Berberine-loaded albumin nanoparticles alleviate liver damage in rats by modulating mitochondrial biogenesis and mitochondria-endoplasmic reticulum interactions
Zaied, Heba; Ashmawy, Mohamed I.; Abdel Karim, Ahmed E.; Ghareeb, Doaa A.; El Wakil, Abeer
Biochemical and Biophysical Research Communications (2025151555 doi
 
Molecular Dynamics Simulation Reveals Structural Insights into Isozyme Selectivity of Carbonic Anhydrase XII Inhibitors in Hypoxic Tumor Microenvironment
Saravanan, Venkatesan; Palani, Sathiya Priya; Chagaleti, Bharath Kumar; Gao, Quan-Ze; Valsaladevi, Anjana Gopi; Kumaradoss, Kathiravan Muthu
Biochemical and Biophysical Research Communications (2025151471 doi
 
Structural, functional, and regulatory evaluation of a cysteine post-translationally modified Gcn5-related N-acetyltransferase
Uychoco, Patricia; Majorek, Karolina A.; Ives, Ashley N.; Le, Van Thi Bich; Caro De Silva, Pamela L.; Paurus, Vanessa L.; Attah, Isaac Kwame; Lipton, Mary S.; Minor, Wladek; Kuhn, Misty L.
Biochemical and Biophysical Research Communications (2025151299 doi
 
Unraveling the Binding Mode of TSC2–Rheb through Protein Docking and Simulations
Pape, Berith F.; Parate, Shraddha; Eriksson, Leif A.; Jha, Vibhu
Biochemistry (2025doi
 
Indole phytochemical camalexin as a promising scaffold for AcrB efflux pump inhibitors against Escherichia coli
Irianti, Marina Ika; Malloci, Giuliano; Ruggerone, Paolo; Lodinsky, Eszter Valéria; Vincken, Jean-Paul; Pos, Klaas Martinus; Araya-Cloutier, Carla
Biomedicine & Pharmacotherapy 182 (2025117779 doi
 
Integrated computational and biosensor-based strategies for the discovery of allosteric SMYD3 ligands using diperodon as a starting point
FitzGerald, Edward A.; Rachman, Moira M.; Cederfelt, Daniela; Myers, Nadine E. M.; Kovryzchenko, Daria; Zhang, He; Barril, Xavier; Koehler, Konrad; Danielson, U. Helena
Bioorganic & Medicinal Chemistry (2025118134 doi
 
Fatty acid conjugated BimBH3 analogues with d‑amino acid substitution as PTPN1 inhibitors with enhanced activity, biostability and orally available potency for the treatment of diabetes
Gong, Liyan; Dong, Guozhen; Zhang, Qianqian; Shi, Yiying; Gu, Zongwen; Yang, Xianmin; Gao, Xiang; Zheng, Yaning; Zhang, Chuanliang
Bioorganic & Medicinal Chemistry (2025118107 doi
 
Derivatization of ophiobolin A and cytotoxicity toward breast and glioblastoma cancer stem cells: Varying the ketone and unsaturated aldehyde moieties
Aroujo, Jaquelin; Parker, Haleigh; Boari, Angela; Mason, Evan; Otakpor, Mackenzie U.; Betancourt, Tania; Kornienko, Alexander; Ciavatta, Maria Letizia; Carbone, Marianna; Evidente, Antonio; Taube, Joseph H.; Romo, Daniel
Bioorganic & Medicinal Chemistry Letters (2025130112 doi
 
Disrupted target binding with acryloyl group as potential Bcr-Abl/C-Src dual kinase inhibitor optimization strategies with maintained antitumor activity
Lin, Ching; Chiang, Hsin-Yi; Chen, Grace Shiahuy; Chern, Ji-Wang; Yu, Chao-Wu
Bioorganic & Medicinal Chemistry Letters (2025130105 doi
 
Modulating the pH-activity profile of the glucose isomerase from Thermotoga marimita by introducing positively and negatively charged residues
Feng, Weihuan; Kong, Qing; Wang, Xihui; Zhao, Ke; Lv, Chao; Yu, Zengyu
Biophysical Chemistry 318 (2025107382 doi
 
BPS2025
Forlemu, Neville Y.; Mwongela, Simon M.; Mallia, Ajay; Tangirala, Sairam
Biophysical Journal 124 (3) (202566a doi
 
Ai-assisted identification of a novel Orthopoxvirus inhibitor targeting F13
Luan, Junwen; Ming, Annan; Zhao, Wenbo; Zhang, Liyuan; Zhang, Leiliang
Biosafety and Health (2025doi
 
Evaluating the impact of CRBN mutations on response to immunomodulatory drugs and novel CRBN-binding agents in myeloma
Chrisochoidou, Yakinthi; Scarpino, Andrea Dr; Morales, Salomon; Martin, Shannon; Bird, Sarah Anne; Li, Yigen Dr; Walker, Brian A.; Caldwell, John; Le Bihan, Yann-Vai Dr; Pawlyn, Charlotte Dr
Blood (2025blood.2024025861 doi
 
Pioneering study of Egyptian Neem and Jojoba extracts with molecular docking combat hospital multidrug resistant bacteria
Khairy, Toka; Amin, Dina Hatem; Salama, Hanaa Mohamed; Elkholy, Iman Mohamed Amin; Elnakib, Mostafa; Gebreel, Hassan Mahmoud; Sayed, Hayam Abd Elnabi
Brazilian Journal of Microbiology (2025doi
 
A novel peptide targeting CCR7 inhibits tumor cell lymph node metastasis
Sun, Yixuan; Qian, Yuzhen; Qiu, Lu; Zhu, Xueqin; Ning, Haoming; Pang, Liwei; Niu, Xiaoshuang; Liu, Yi; Zhou, Xiuman; Chen, Guanyu; Zhai, Wenjie; Gao, Yanfeng
Cancer Immunology, Immunotherapy 74 (5) (2025153 doi
 
Chidamide functions as a VISTA/PSGL-1 blocker for cancer immunotherapy
Niu, Xiaoshuang; Zhao, Wenshan; Zhou, Xiuman; Luo, Feiyu; Xiao, Youmei; Luo, Tao; Sui, Xinghua; Li, Wanqiong; Dong, Qingyu; Yang, Xin; He, Zhuoying; Shang, Wenzhi; Sun, Yixuan; Gao, Yanfeng
Cancer Immunology, Immunotherapy 74 (3) (2025104 doi
 
Antibiotic target discovery by integrated phenotypic and activity-based profiling of electrophilic fragments
Jin, Yizhen; Jana, Sadhan; Abbasov, Mikail E.; Lin, Hening
Cell Chemical Biology (2025doi
 
Developing novel Lin28 inhibitors by computer aided drug design
Matias-Barrios, Victor M.; Radaeva, Mariia; Rosellinny, Graciella; Jia, Qiongqiong; Xie, Ning; Villanueva, Monica; Ibrahim, Hanadi; Smith, Jason; Gleave, Martin; Lallous, Nada; Straus, Suzana K.; Cherkasov, Artem; Dong, Xuesen
Cell Death Discovery 11 (1) (20255 doi
 
The intestinal fungus Aspergillus tubingensis promotes polycystic ovary syndrome through a secondary metabolite
Wu, Jiayu; Wang, Kai; Qi, Xinyu; Zhou, Shuang; Zhao, Shuyun; Lu, Meisong; Nie, Qixing; Li, Meng; Han, Mengwei; Luo, Xi; Yun, Chuyu; Wang, Pengcheng; Li, Rong; Zhong, Chao; Yu, Xiaofei; Yin, Wen-bing; Jiang, Changtao; Qiao, Jie; Pang, Yanli
Cell Host & Microbe 33 (1) (2025119-136.e11 doi
 
KRASG12D-driven pentose phosphate pathway remodeling imparts a targetable vulnerability synergizing with MRTX1133 for durable remissions in PDAC
Jiang, Xiangyan; Wang, Tao; Zhao, Bin; Sun, Haonan; Dong, Yuman; Ma, Yong; Li, Zhigang; Wu, Yuxia; Wang, Keshen; Guan, Xiaoying; Long, Bo; Qin, Long; Shi, Wengui; Shi, Lei; He, Qichen; Liu, Wenbo; Li, Mingdou; Xiao, Lixia; Zhou, Chengliang; Sun, Hui; Yang, Jing; Guan, Junhong; Zhou, Huinian; Yu, Zeyuan; Jiao, Zuoyi
Cell Reports Medicine 6 (2) (2025doi
 
Inhibition of N6-methyladenosine methylation of ASC by berberine ameliorates pyroptosis of renal tubular epithelial cells in acute kidney injury
Li, Jiacheng; Lv, Linxiao; Hu, Mingyang; Liu, Zhangsuo; Zhou, Sijie
Cellular Signalling (2025111732 doi
 
Study on the Asymmetric Synthesis of Chiral 3,3,3-Trifluoro-2-Hydroxypropanoic Acids by Lactate Dehydrogenase
Wu, Jingfei; Nuylert, Aem; Iwaki, Misako; Miki, Shinsuke; Asano, Yasuhisa
ChemBioChem n/a (n/a) (20252500047 doi
 
Unveiling the Architecture of Human Fibrinogen: A Full-length Structural Model
Medeiros Figueredo, Romina; Cantero, Jorge; Borthagaray, Graciela; Paulino, Margot
ChemBioChem n/a (n/a) (2025e202400425 doi
 
Discriminating High from Low Energy Conformers of Druglike Molecules: An Assessment of Machine Learning Potentials and Quantum Chemical Methods
Kong, Linghan; Bryce, Richard A.
ChemPhysChem n/a (n/a) (2025e202400992 doi
 
Synthesis of New Thiazole-Pyrazole Analogues: Molecular Modelling, Antiproliferative/Antiviral Activities, and ADME Studies
Siddiq, Hind A.; Imam, Mohammed A.; Alsharif, Shaker T.; Attar, Roba M. S.; Almughathawi, Renad; Alshammari, Nadiyah M.; Halawani, Nuha M.; El-Metwaly, Nashwa M.
Chemical Biology & Drug Design 105 (3) (2025e70090 doi
 
Exploring phytoconstituent for confronting the symptoms of polycystic ovarian syndrome: molecular dynamics simulation, quantum studies, free energy calculations and network analysis approaches
Lakshmi Narayanan, Pavithra; Vellapandian, Chitra
Chemical Physics Impact 10 (2025100787 doi
 
Pharmacophore-based approach for the identification of prospective UDP-2,3-diacylglucosamine hydrolase (LpxH) inhibitor from natural product database against Salmonella Typhi
Karthikeyan, Divyapriya; Kumar, Sanjit; Jayaprakash, N. S.
Chemical Physics Impact (2025100824 doi
 
Predicting human olfactory perception by odorant structure and receptor activation profile
Ihara, Yusuke; Ijichi, Chiori; Nogi, Yasuko; Sugiki, Masayuki; Kodama, Yuko; Ihara, Sayoko; Shirasu, Mika; Hirokawa, Takatsugu; Touhara, Kazushige
Chemical Senses (2025bjaf002 doi
 
Design, Synthesis, and Evaluation of 7-Vinylcoumarin Derivatives as Agrochemicals: Biological Activities and Molecular Docking Insights
Zhang, Jianwen; Gao, Longxiang; Lei, Zhenlin; Liu, Huaxin; Li, Jiaomei; Luo, Yanping; Wang, Lanying
Chemistry & Biodiversity n/a (n/a) (2025e202403118 doi
 
TiO2 Nanoparticles Catalyzed Synthesis, Pharmacological Evaluation, and Molecular Docking Studies of New Pyrido[2,3-d]Pyrimidine Derivatives as CDK1 Inhibitors
Alsalam, Eman Abd; Awad, Hanem M.; Abbass, Eslam M.; Hafez, Hend N.; Assy, Mohamed G.; Ali, Ali Khalil; El Farargy, Ahmed F.; Fathalla, Maher
Chemistry Africa (2025doi
 
“Isolation and Characterization of Steroidal Alkaloids from Sarcococca Saligna, Their Antinociceptive, Anti-Inflammatory, and Gastroprotective Effect in Animal's Model”
Kifayatullah, Muhammad; Shaheen; Wadood, Sadaf; Shah, Nisar Zamin; Jan, Naeem Ullah; Halim, Sobia Ahsan; Rehman, Najeeb Ur; Hussien, Abdelwahab H.; Ahmed, Mesaik M.; Khan, Ajmal; Harrasi, Ahmed Al
ChemistrySelect 10 (13) (2025e202404600 doi
 
Virtual Screening and Molecular Simulation Uncover Potent Traditional Chinese Medicine Small Molecules Against SARS-CoV-2 Mpro
Han, Di; Yang, Hongkun; Gao, Yunlong; Xue, Yiwei; Liu, Fengxiang; Wang, Meiting; Lu, Jiarui; Liu, Taigang; Xu, Yongtao
ChemistrySelect 10 (12) (2025e202405037 doi
 
Enantioselective OTUD7B fragment discovery through chemoproteomics screening and high-throughput optimisation
Vuorinen, Aini; Kennedy, Cassandra R.; McPhie, Katherine A.; McCarthy, William; Pettinger, Jonathan; Skehel, J. Mark; House, David; Bush, Jacob T.; Rittinger, Katrin
Communications Chemistry 8 (1) (202512 doi
 
atomes: Analysis, visualization, edition and post-processing of 3D atomic scale models
Le Roux, Sébastien
Computational Materials Science 253 (2025113805 doi
 
Structural determinants of IgG1-FcγRIIIa interaction: a comprehensive computational study
Bianchi, Davide; Saporiti, Simona; Palinsky, Wolf; Mariem, Omar Ben; Guerrini, Uliano; Rossi, Mara; Centola, Fabio; Eberini, Ivano
Computational and Structural Biotechnology Reports (2025100034 doi
 
Imine Derivatives of Hydrochlorothiazide Bear Potential Diuretic Activity in in-vivo Experimental Model by Targeting Renal Outer Medullary Potassium Channel
Warda, Hafiza Saliha; Sultana, Kishwar; Ullah, Irfan; Jan, Afnan; Abdellattif, Magda H.; Kashtoh, Hamdy; Rehman, Najeeb Ur; Khan, Ajmal; Al-Harrasi, Ahmed
Current Medicinal Chemistry (2025doi
 
Bioinformatics study and cytotoxicity of several curcumin analogues in ovarian cancer
Murwanti, Retno; Ritmaleni; Ujiantari, Navista Sri Octa; Putra, I. Made Rhamandana; Wahyudi, Aliffian Farhan; Arifka, Vigha Ilmanafi
Current Research in Toxicology (2025100230 doi
 
Li Qi Huo Xue Di Wan Attenuates Cardiac and Lung Injury in Mice Exposed to Hypoxia Through Suppression of Apoptosis
Yi-Yue, Zhang; Chang-Long, Zhuang; Can, Tang; Qi-Ling, Dou; Xiu-Ju, Luo; Jun, Peng
Current Traditional Medicine 11 (20251-14 doi
 
Exploring the binding potential of natural compounds to carbonic anhydrase of cyanobacteria through computer-based simulations
Padhiary, Archana; Mir, Showkat Ahmad; Pati, Aiswarya; Nayak, Binata
Discover Applied Sciences 7 (3) (2025206 doi
 
Performance evaluation of cationic cellulose for anionic dyes adsorption from real wastewater and docking studies
Saad, Heba E.; Hashem, Mohamed A.; El-Sayed, Yusif S.; Gaber, Mohamed; El-Reash, Gaber M. Abu
Discover Chemistry 2 (1) (202538 doi
 
Insilico, network pharmacology and neural network studies on Sida acuta Burm f.- based phytochemicals targeting NADH-ubiquinone oxidoreductase
Oyebamiji, Abel Kolawole; Akintelu, Sunday A.; Ebenezer, Oluwakemi; Akintayo, Emmanuel T.; Akintayo, Cecilia O.; Adeoye, Moriam D.; Peter, Ajayi Ayomide; Elbasyouni, Amel
Discover Pharmaceutical Sciences 1 (1) (20253 doi
 
Exploring Hornstedtia scyphifera: an extensive multimethod phytochemical investigation reveals the chemical composition and bioactive potential
Kappen, Jonas; David, Andreea; Pieplow, Klara; Wujtschik, Annika; Ware, Ismail; Dhar, Dipendu; Wagner, Christoph; Davari, Mehdi D.; Franke, Katrin; Wessjohann, Ludger A.
Discover Plants 2 (1) (20256 doi
 
Novel 3-Substituted-2H-Chromene Scaffold Based Fluorinated Hydrophobic Fragment as In-Vitro Antiproliferative Agents and Apoptosis Inducers Targeting Both VEGFR-2/BRAFV600E and h-DHFR With Molecular Docking Simulation
Salem, Mohamed A.; Abusaif, Moustafa S.; Gohar, Nirvana A.; Ammar, Yousry A.; Ragab, Ahmed
Drug Development Research 86 (2) (2025e70085 doi
 
Design, Synthesis and Molecular Docking of New Thieno[2,3‑d]Pyrimidin-4-One Derivatives as Dual EGFR and FGFR Inhibitors
Sultan, Sara; Tawfik, Samar S.; Selim, Khalid B.; Nasr, Magda N. A.
Drug Development Research 86 (1) (2025e70061 doi
 
Computational approaches for the identification of novel metal-binding pharmacophores: advances and challenges
Xiong, Guoli; Xiao, Zhiyan
Drug Discovery Today (2025104293 doi
 
Exploring the in vitro anti-diabetic potential and in silico studies of 2, 3 and 2, 6-dichloroIndolinone
Rauf, Abdur; Alam, Waqas; Khan, Momin; W. Darwish, Hany; Daglia, Maria; A. Elhenawy, Ahmed; Khan, Haroon
Drug Target Insights 19 (1) (202511-17 doi
 
Novel amyloid-β oligomer-targeted fluorescent probes
Kashiyama, Rikuto; Watanabe, Hiroyuki; Akasaka, Takahiro; Ono, Masahiro
Dyes and Pigments (2025112680 doi
 
New Approach Methodologies (NAMs) to assess killer whale (Orcinus orca) estrogen receptor alpha (ERα) transactivation potencies by DDTs and their risks
Robledo, Dave Arthur R.; Kumagawa, Takahito; Ochiai, Mari; Iwata, Hisato
Ecotoxicology and Environmental Safety 291 (2025117761 doi
 
Mechanisms Underlying the Size-Dependent Neurotoxicity of Polystyrene Nanoplastics in Zebrafish
Wu, Chao; Zhang, Hong-Jie; Ma, Hongxia; Ji, Rong; Pan, Ke; Yue, Tongtao; Miao, Ai-Jun
Environmental Science & Technology (2025doi
 
Assessing Impact of Hinge Flexibility on Predicted Second Osmotic Virial Coefficients
Shoemaker, Terrance; Amer, Brendan R.; Razinkov, Vladimir; Huh, Joon; Wei, Yangjie; Qi, Wei; Roberts, Christopher J.
European Journal of Pharmaceutical Sciences (2025107064 doi
 
Combining in vitro, in vivo, and in silico approaches to evaluate the effect of serotonergic-based topical therapies on mild to moderate psoriasis
Martins, Ana M.; Gonçalves, Lídia; Simões, Sandra; Serra, Patrícia A.; Guedes, Rita C.; Ribeiro, Helena; Marto, Joana
European Journal of Pharmaceutical Sciences 206 (2025107013 doi
 
The latest progress in assay development in leishmaniasis drug discovery: a review of the available papers on PubMed from the past year
dos Santos, Gabriela P.; Coelho, Adriano C.; Reimão, Juliana Q.
Expert Opinion on Drug Discovery (20251-16 doi
 
Antiproliferative trichothecene derivatives from an endophytic fungus fusarium equiseti Z8
Zhang, Xuan; Liu, Bo; Du, Ji-Yang; Zhang, Xu; Kang, Ya-Nan; Li, Li; Li, Ning; Pan, Ying-Ni; Sun, Yi
Fitoterapia 182 (2025106476 doi
 
Chemical constituents and their anti-ferroptosis activities of Ajuga bracteosa
Gao, Jun; Ding, Yuan; Gu, Qiong
Fitoterapia (2025106444 doi
 
Metabolic differences and potential action mechanisms of core antioxidant substances of Gastrodia elata in Guizhou Province, China by untargeted metabolomics and network pharmacology
Wang, Weitao; Mao, Jiayi; Chen, Jiangyan; Huang, Wenyuan; Duan, Tingting; Zhang, Ying; Wu, Xiaomao
Food Bioscience 65 (2025106143 doi
 
Exploring the dietary impacts and potential metabolic mechanisms of astaxanthin in common carp (Cyprinus carpio)
Zhang, Jiawei; Du, Yishuai; Sun, Yue; Zhou, Li; Xu, Jianping; Sun, Jianming; Qiu, Tianlong
Food Chemistry 465 (2025142069 doi
 
The Phenolic Signature of Fruits and Leaves Modulates TRPV1 and TRPA1 Transient Receptor Potential Channels: A Metabolomics, In Vitro, and In Silico Study
Zhang, Leilei; Iannotti, Fabio Arturo; R. Saber, Fatema; K. Arafa, Reem; Schiano Moriello, Aniello; A. Rasle, Rasha; Soria-Lopez, Anton; G. Abd El-Gawwad, Sara; Rocchetti, Gabriele; Otero, Paz; Kulinowski, Łukasz; Skalicka-Woźniak, Krystyna; Lucini, Luigi; Simal-Gandara, Jesus
Food Science & Nutrition 13 (4) (2025e70075 doi
 
Heating Differentiates Pecan Allergen Stability: Car i 4 Is More Heat Labile Than Car i 1 and Car i 2
Brown, C. Nacaya; Dupre, Rebecca A.; Ebmeier, Christopher C.; Patil, Shaina; Smith, Brennan; Mattison, Christopher P.
Food Science & Nutrition 13 (2) (2025e4747 doi
 
Elaidic acid induces testicular oxidative stress, inflammation, Wnt/β-catenin elevation and abnormalities in steroidogenesis, spermatogenesis and histo-architecture in Sprague Dawley rats
Alzahrani, Fuad M.; Hayat, Muhammad Faisal; Akbar, Ali; Zahara, Syeda Sania; Alsuwat, Meshari A.; Alzahrani, Khalid J.; El-Emam, Ahmed
Food and Chemical Toxicology (2025115365 doi
 
Inhibition of carbohydrate digestive enzymes by a complementary essential oil blend: in silico and mixture design approaches
Loukili, El Hassania; Fadil, Mouhcine; Elrherabi, Amal; Er-rajy, Mohammed; Taibi, Mohamed; Azzaoui, Khalil; Salghi, Rachid; Sabbahi, Rachid; Alanazi, Mohammed M.; Rhazi, Larbi; Széchenyi, Aleksandar; Siaj, Mohamed; Hammouti, Belkheir
Frontiers in Pharmacology 16 (2025doi
 
Discovery of highly potent and novel LSD1 inhibitors for the treatment of acute myeloid leukemia: structure-based virtual screening, molecular dynamics simulation, and biological evaluation
Hong, Ye; Wang, Yuting; Hao, Ziyi; Zhang, Xingxia; Si, Yejun; Lin, Guoqiang; Zhang, Shurong; Niu, Miao-Miao; Yang, Xiaotian; Zhang, Yanming
Frontiers in Pharmacology 16 (2025doi
 
Prediction of potential drug targets and key inhibitors (ZINC67974679, ZINC67982856, and ZINC05668040) against Rickettsia felis using integrated computational approaches
Rahman, Sudais; Liu, Hsien; Shah, Mohibuallah; Almutairi, Mashal M.; Liaqat, Iram; Tanaka, Tetsuya; Chen, Chien-Chin; Alouffi, Abdulaziz; Ali, Abid
Frontiers in Veterinary Science 11 (2025doi
 
Drug repurposing of argatroban, glimepiride and ranolazine shows anti-SARS-CoV-2 activity via diverse mechanisms
El Sobky, Shereen A.; Fawzy, Injie O.; Ahmed, Mahmoud S.; Ragheb, Manon; Hamad, Merna H. M.; Bahaaeldin, Rowan; Fahim, Salma A.; Saad, Rana; Khalil, Ziad A.; Mahmoud, Sara H.; Mostafa, Ahmed; Ali, Mohamed A.; Sadek, Hesham A.; El-Ekiaby, Nada; Abdelaziz, Ahmed I.
Heliyon (2025e41894 doi
 
Discovery of novel EGFR and BRAF inhibitors by machine learning approach
Zhang, Hailong; Tong, Henry H. Y.
Intelligent Oncology 1 (1) (20257-16 doi
 
Galloflavin mitigates acute kidney injury by suppressing LDHA-dependent macrophage glycolysis
Wei, Jie; Chen, Xin-yu; Wang, Zhi-juan; Li, Xiang-yu; Zhang, Meng-meng; Sun, Tao; Zhang, Xin-ru; Wang, De-guang; Hou, Chao; Meng, Xiao-ming
International Immunopharmacology 150 (2025114265 doi
 
HETEROCYCLIC CATHINONES AS POTENTIAL SCHIZOPHRENIA THERAPEUTICS
Walaska, Hana; Maryska, Michal; Svobodova, Lucie; Dehaen, Wim; Kuchar, Martin
International Journal of Neuropsychopharmacology 28 (Supplement_1) (2025i176-i177 doi
 
Biophysical Characterization of the Interaction Between Neuropilin-1 b1 Domain and an N93P Peptide from Human T-Cell Leukemia Virus Type 1 Envelope Glycoprotein Surface Unit
Kusunoki, Hideki; Ohshima, Chinatsu; Tanaka, Toshiyuki; Hamaguchi, Isao; Mori, Shigetarou
International Journal of Peptide Research and Therapeutics 31 (3) (202545 doi
 
Supramolecular delivery systems for polyphenols: A green approach to predict in vivo permeability through an in vitro setup
Sguizzato, Maddalena; Agosta, Federica; Ciancetta, Antonella; Grassi, Mario; Cortesi, Rita; di Cagno, Massimiliano Pio
International Journal of Pharmaceutics (2025125170 doi
 
Mechanistic Insights into the Membrane Permeabilization Activity of Antimicrobial Prenylated Isoflavonoids: A Comparative Study of Glabridin, Wighteone, and Lupiwighteone
Bombelli, Alberto; Calligari, Paolo; Bocchinfuso, Gianfranco; Vincken, Jean-Paul; Abee, Tjakko; den Besten, Heidy M. W.; Stella, Lorenzo; Araya-Cloutier, Carla
Journal of Agricultural and Food Chemistry (2025doi
 
The Hoverfly Attracting Property of a Methyl Salicylate-Containing (E)-β-Farnesene Analog (3e) and Potential Mechanism by Mediating the EcorOBP15 and EcorOR3
Liu, Yan; Zhang, Yimeng; Chen, Chen; Pan, Shixiang; Lu, Xingxing; Shi, Zhuo; Yang, Zhaokai; Sun, Ruihong; Zhang, Ganyu; Wang, Bing; Huang, Yiwen; Qin, Yaoguo; Li, Xuesheng; Yang, Xinling
Journal of Agricultural and Food Chemistry (2025doi
 
Identification of novel biallelic mutations in CFAP53 associated with fetal situs inversus totalis and literature review
Guo, Zhenglong; Tan, Mengyao; Zhu, Hongjie; Lou, Guiyu; Xia, Xiaoliang; Yang, Wenke; Lv, Yibing; Huang, Jianmei; Wang, Ruili; Hao, Bingtao; Liao, Shixiu
Journal of Applied Genetics (2025doi
 
Integration of QSAR models with high throughput screening to accelerate the development of polishing chromatography unit operations
Hartmann, Michael; Rauscher, Michael; Robinson, Julie; Welsh, John; Roush, David
Journal of Chromatography A 1747 (2025465818 doi
 
Novel GC MS/MS method for bioanalysis of pyrroloquinoline quinone, a potential cognitive enhancer in mice brains
Mostafa, Mai; Abdel-Kader, Reham; Hanafi, Rasha
Journal of Chromatography B (2025124559 doi
 
Synthesis, structural, equilibrium, anticancer, DNA binding, and computational investigation of binary and ternary palladium(II) complexes based on N-(2-hydroxyethyl)ethylenediamine
Ragab, Mona S.; Shoukry, Mohamed M.; El-Madany, Hanaa M.; Haukka, Matti; van Eldik, Rudi; Khalf-Alla, Perihan A.
Journal of Coordination Chemistry (20251-22 doi
 
Investigation of Moxifloxacin-loaded terpenes enriched cationic cerosomes (TECs) as an adjunct pulmonary therapy for COVID-19: in-silico study; D-optimal optimization; aerodynamic simulation assessment and cytotoxic evaluation
Albash, Rofida; Yousry, Carol; El Hassab, Mahmoud A.; Eldehna, Wagdy M.; Alaa-Eldin, Ahmed Adel
Journal of Drug Delivery Science and Technology (2025106683 doi
 
Design and synthesis of novel HDAC6 inhibitor dimer as HDAC6 degrader for cancer treatment by palladium catalysed dimerisation
Lin, Ching; Hsu, Jui-Ling; Hsu, Yu-Tung; Fan, Kuo-Chen; Wu, Sian-Siou; Lin, Miao-Hsia; Guh, Jih-Hwa; Yu, Chao-Wu
Journal of Enzyme Inhibition and Medicinal Chemistry 40 (1) (20252468355 doi
 
Discovery of a novel PLK1 inhibitor with high inhibitory potency using a combined virtual screening strategy
Xu, Zhen; Guan, Lixia; Wang, Yuting; Niu, Miao-Miao; Ruan, Yashi; Xu, Cen; Yang, Li
Journal of Enzyme Inhibition and Medicinal Chemistry 40 (1) (20252467798 doi
 
Impact of Monascus purpureus nano-biomass pigment-rich powder on noodle quality
Mahmoud, Eman A. M.; Kishk, Yasser F. M.; Khalifa, Ibrahim; Fattah, Abdel Fattah A. Abdel
Journal of Food Measurement and Characterization (2025doi
 
Arabic gum-nitroso-hemoglobin as natural antimicrobial conjugates for enhanced preservability of minced beef subjected to freeze–thaw process: evidence from HS-SPME/GC–MS, LF-NMR, and docking analysis
Mohammed, Hammad Hamed Hammad; Khalifa, Ibrahim; Jin, Guofeng; Ma, Meihu; Salah, Mahmoud; Maqsood, Sajid
Journal of Food Measurement and Characterization (2025doi
 
Effect of red rice nano-flour of Monascus purpureus on the nutritional and cooking parameters of dried noodles at different drying temperatures
Fattah, Abdel Fattah A. Abdel; Kishk, Yasser F. M.; Khalifa, Ibrahim; Mahmoud, Eman A. M.
Journal of Food Science and Technology (2025doi
 
Identification of novel natural inhibitors of Mycobacterium tuberculosis DNA-directed RNA polymerase via extensive computational screening and MMGBSA
Azmi, Muhammad Bilal; Waqas, Muhammad; Durran, Shahid; Hussain, Palvasha; Noori, Muhammad Yahya; Haseen Ahmed, Syed Danish; Othman, Gehan Ahmed; Ahmed, Mesaik M.; Halim, Sobia Ahsan; Khan, Ajmal; Al-Harrasi, Ahmed
Journal of Molecular Liquids (2025127360 doi
 
Cocrystallization of 5-FU and novel sulfathiazole Schiff bases: Synthesis, theoretical and experimental anticancer evaluation against MCF-7 and SW-480 cancer cell lines
Aslam, Aqsa; Parveen, Ayesha; Bano, Nargis; Jabeen, Ishrat; Hassan, Muhammad; Aftab, Usman; Hareem, Mah e; Jubeen, Farhat; Shawaf, Jawaher; Nazir, Arif; Iqbal, Munawar
Journal of Molecular Liquids 420 (2025126850 doi
 
Niacin Ester Derivative of Brefeldin A as a Potential Dual-Target Arf1/BMX Inhibitor for Bladder Cancer
Liu, Jian-Yu; Song, Yi-Jing; Li, Peng-Jie; Gao, Yang; Wei, Mei-Yan; Shao, Chang-Lun
Journal of Natural Products (2025doi
 
Stereoanalysis of the Antiparasitic Natural Product Callunene and Its Synthetic Intermediates
Ferenczei, Jiří; Blahout, Vilém; Dvořáková, Hana; Brancale, Andrea; Cuřínová, Petra; Labíková, Magdaléna; Kohout, Michal; Setnička, Vladimír; Perlíková, Pavla
Journal of Natural Products (2025doi
 
Aculeapyridones A-Q, Pyranopyridone Alkaloids with Protective Effects against Acetaminophen-Induced Acute Liver Injury Discovered from a Coculture of Aspergillus aculeatinus WHUF0198 and a Penicillium sp
Chen, Wei-Chen; Song, Xin; Wu, Jun; Zhong, Yu-Ting; Edjah, Philomina Panin; Zhang, Qin-Yong; Li, Mu; Zhu, Kong-Kai; Tian, Congkui; Yuan, Rui-Ying; Wu, Xiao-Yan; Gao, Ping; Hong, Kui; Zhang, Meng-Ke; Ping, Jie; Cai, You-Sheng
Journal of Natural Products (2025doi
 
Screening, Discovery, and Optimization of the Natural Antitubercular Chlorflavonin from a Marine-Derived Fungal Library
Wang, Cui-Fang; Wang, Wen-Hui; Xu, Ying; Zhang, Qun; Wei, Mei-Yan; Gu, Yu-Cheng; Xu, Tong-Yi; Shao, Chang-Lun
Journal of Natural Products (2025doi
 
Prioritization of potential drug targets for diabetic kidney disease using integrative omics data mining and causal inference
Zhang, Junyu; Peng, Jie; Yu, Chaolun; Ning, Yu; Lin, Wenhui; Ni, Mingxing; Xie, Qiang; Yang, Chuan; Liang, Huiying; Lin, Miao
Journal of Pharmaceutical Analysis (2025101265 doi
 
Uncovering the covalent inhibitors of SARS-CoV-2 Mpro in Tibetan edible herb Rhodiola crenulata and their synergistic anti-Mpro mechanism
Zhu, Guang-Hao; Zhang, Ya-Ni; Xiong, Yuan; Hou, Xu-Dong; Zhang, Qing-Guang; Zhang, Zhao-Qin; Zhuang, Xiao-Yu; Zhang, Wei-Dong; Ge, Guang-Bo
Journal of Pharmaceutical Analysis (2025101224 doi
 
Calothrixin B by docking JAK2 is a potential therapeutic inhibitor for pancreatic ductal adenocarcinoma
Wang, Yang; Esa, Sayed S.; Yu, Rongji; Ibrahim, Sherif Abdelaziz; Li, Yixin; Sheng, Zhi; Wu, Jinzheng; Jiang, Hao; Di, Xiaotang; Wen, Doudou; Liu, Sheng; Zhang, Shubing
Journal of Pharmacy and Pharmacology (2025rgae149 doi
 
S-Adenosyl-l-methionine-dependent cinnamic acid carboxyl methyltransferase from the basidiomycete Tricholoma matsutake, which has low identity but similar overall structure to plant SABATH-family enzymes
Hattori, Takefumi; Katayama, Megumi; Tsuzuki, Hiromitsu; Okamoto, Yumi; Ida, Kyosuke; Yoshizumi, Mariko; Abe, Masanori; Kawakami, Ryushi; Hayashi, Junji; Yamamura, Masaomi
Journal of Wood Science 71 (1) (202511 doi
 
eSylites: Synthetic Probes for Visualization and Topographic Mapping of Single Excitatory Synapses
Huhn, Christiane; Ho, Sheng-Yang; Schulte, Clemens; Khayenko, Vladimir; Hemmen, Katherina; Peulen, Thomas-Otavio; Wiessler, Anna-Lena; Bothe, Sebastian; Bej, Aritra; Talucci, Ivan; Schönemann, Lars; Werner, Christian; Schindelin, Hermann; Strømgaard, Kristian; Villmann, Carmen; Heinze, Katrin G.; Hruska, Martin; Hell, Johannes W.; Maric, Hans M.
Journal of the American Chemical Society (2025doi
 
Computational Identification of Potential Organocatalysts (CIPOC) Reveals a 2-aminoDMAP/Urea Catalyst Superior to Its Thiourea Analogue
Alsancak-Koca, Sezen; Çamlısoy, Yeşim; Bakırcı, İrem; Işık, Murat; Çelebi-Ölçüm, Nihan; Tanyeli, Cihangir
Journal of the American Chemical Society (2025doi
 
In silico assessments, Design, synthesis, and biological evaluation of 5-methylisoxazole-4-carboxamide derivatives
Khedkar, Pravin; Ukhade, Rutuja; Chaudhari, Hemchandra K.
Journal of the Indian Chemical Society 102 (3) (2025101616 doi
 
Tea polysaccharide’s role in inhibited protein alterations of Hypophthalmichthys molitrix and in-depth molecular interaction mechanism during fluctuated frozen storage
Walayat, Noman; Kulawik, Piotr; Khalifa, Ibrahim; Niaz, Nadia; Yasir, Muhammad; Mohammed Ahmed, Isam A.; Wei, Ran; Su, Zhucheng
LWT (2025117568 doi
 
Identification of a novel fibroblast growth factor receptor-agonistic peptide and its effect on diabetic wound healing
Farooq, Mariya; Hwang, Moonjong; Khan, Abdul Waheed; Batool, Maria; Ahmad, Bilal; Kim, Wook; Kim, Moon Suk; Choi, Sangdun
Life Sciences (2025123432 doi
 
pH-triggered prodrug micelles loaded with curcumin-terminated mono, di-pyrimidine as visual antitumor agents: study of simulated sustained release in gastrointestinal tract, fluorescence imaging, and bioactivity evaluation
Feng, Jiankang; Wang, Shuo; Chai, Tiantian; Zhang, Mengtong; Hu, Jingnan; Feng, Xibing; Shi, Junhua; Shao, Shihe; Lu, Chichong; Jin, Guofan
Macromolecular Research (2025doi
 
Doxorubicin-loaded PEGylated liposome modified with ANGPT2-specific peptide for integrative glioma-targeted imaging and therapy
Li, Hongyan; Gan, Rong; Liu, Jiadi; Xu, Duling; Zhang, Qiyue; Tian, Haidong; Guo, Huijun; Wang, Haijun; Wang, Zhimin; Zeng, Xianwu
Materials Today Bio (2025101455 doi
 
An in silico designed peptide-loaded hydrogel is able to accelerate the healing of bacteria-infected wounds in mice
Yang, Chin-Hao; Hsu, Hao-Jen; Liou, Je-Wen; Chen, Guan-Ting; Lai, Xing-Yan; Chuang, Chin-Hsien; Chang, Chun-Chun
Materials Today Chemistry 43 (2025102478 doi
 
An evaluation of spirooxindoles as blocking agents of SARS-CoV-2 spike/ACE2 interaction: synthesis, biological evaluation and computational analysis
Ehinak, Albert Enama; Lobe, Maloba M. M.; Eni, Donatus B.; Simoben, Conrad V.; Tietjen, Ian; Mbenga Tjegbe, Mathieu J.; Cassel, Joel; Salvino, Joseph M.; Montaner, Luis J.; Sippl, Wolfgang; Efange, Simon M. N.; Ntie-Kang, Fidele
Medicinal Chemistry Research (2025doi
 
Unveiling the Anti-Biofilm Potential of Bee Venom Against Multi-Drug Resistant Human Pathogenic Bacteria and Fungi: Perspectives into the Efficacy and Possible Mechanisms
Awad, Ebtehal H.; Arafa, Walaa; Ali, Hala R.; Barakat, Olfat S.; Ahmed, Marwa N.
Microbial Pathogenesis (2025107358 doi
 
Synthesis, DFT study, in silico ADMET evaluation, molecular docking, and QSAR analysis of new anti-tuberculosis drugs derived from 2-hydroxybenzohydrazide derivatives
Hassanien, Alaa E.; Elsherbiny, Ghada; Abdelfattah, Gamal M.; Abdel-Aziz, Marwa M.; El-Hagrassey, Eman A.
Molecular Diversity (2025doi
 
Optimizing antibody stability and efficacy in CD47- SIRPα inhibition via computational approaches
Laddha, Kapil; Sobhia, M. Elizabeth
Molecular Diversity (2025doi
 
Citronellal Alleviates Insulin Resistance in High-Fat Diet/Streptozocin Model: Role of Asprosin/Olfactory Receptor Axis
Abdelaziz, Aya; El-Far, Yousra M.; Abdel-Rahman, Noha
Molecular Nutrition & Food Research n/a (n/a) (2025e202400654 doi
 
Designing the Aplysia punctata Arginine-Depleting Enzyme for Tumor Targeting
Wolkersdorfer, Alena Maria; Endo, Yuri; Kehrein, Josef; Kappus, Maximilian; Hattori, Sumitto; Gutmann, Marcus; Rudel, Thomas; Caliskan, Neva; Lühmann, Tessa; Kato, Yoshinori; Meinel, Lorenz
Molecular Pharmaceutics (2025doi
 
Structural Insights and Development of Small Molecule Inhibitors Targeting TGF-β  Receptor I: A Comprehensive Review of Clinical Advances
Leonardo-Sousa, Carlota; Barriga, Rodrigo; Florindo, Helena F.; Acúrcio, Rita C.; Guedes, Rita C.
Molecular Therapy: Oncology (2025doi
 
Computational assessment of the binding modes of the first VHL-recruiting PROTACs designed for oncogenic KRasG12C
Costa Franca, Tanos Celmar; Delaire, Eleonore K.; Ebert, Maximilian C. C. J. C.; Ajamian, Al; LaPlante, Steven; Drummond, M.
New Journal of Chemistry (2025doi
 
Antitumor effect of curcumin analog on osteosarcoma through the inhibition of p300‑mediated histone acetylation
Tatsumi, Yasutoshi; Masuda, Tatsuya; Watanabe, Takayoshi; Utomo, Rohmad Yudi; Zulfin, Ummi Maryam; Meiyanto, Edy; Ozaki, Toshinori; Suenaga, Yusuke; Kamikubo, Yasuhiko
Oncol Rep 53 (4) (202547 doi
 
Structure-based design of an immunogenic, conformationally stabilized FimH antigen for a urinary tract infection vaccine
Silmon de Monerri, Natalie C.; Che, Ye; Lees, Joshua A.; Jasti, Jayasankar; Wu, Huixian; Griffor, Matthew C.; Kodali, Srinivas; Hawkins, Julio Cesar; Lypowy, Jacqueline; Ponce, Christopher; Curley, Kieran; Esadze, Alexandre; Carcamo, Juan; McLellan, Thomas; Keeney, David; Illenberger, Arthur; Matsuka, Yury V.; Shanker, Suman; Chorro, Laurent; Gribenko, Alexey V.; Han, Seungil; Anderson, Annaliesa S.; Donald, Robert G. K.
PLOS Pathogens 21 (2) (2025e1012325 doi
 
Precision spatiotemporal analysis of large-scale compound–protein interactions through molecular dynamics simulation
Matsumoto, Shigeyuki; Isaka, Yuta; Kanada, Ryo; Ma, Biao; Araki, Mitsugu; Chiba, Shuntaro; Tokuhisa, Atsushi; Iwata, Hiroaki; Ishida, Shoichi; Akinaga, Yoshinobu; Terayama, Kei; Kojima, Ryosuke; Harada, Yohei; Takemura, Kazuhiro; Honma, Teruki; Kitao, Akio; Okuno, Yasushi
PNAS Nexus (2025pgaf094 doi
 
Understanding the mode of action of BtEcR/USP-LBD with benzpyrimoxan in combination with high throughput SPR screening and molecular simulation approaches
Wang, Hongyan; Cui, Jialin; Feng, Yanjiao; Sun, Xinpeng; Tan, Qinyan; Zhang, Li
Pesticide Biochemistry and Physiology 210 (2025106384 doi
 
Prediction of the Extent of Blood–Brain Barrier Transport Using Machine Learning and Integration into the LeiCNS-PK3.0 Model
Gülave, Berfin; van den Maagdenberg, Helle W.; van Boven, Luke; van Westen, Gerard J. P.; de Lange, Elizabeth C. M.; Coen van Hasselt, J. G.
Pharmaceutical Research (2025doi
 
Synthesis and biological evaluation of methylene spacer incorporated 4-methylsulfonyl phenyl semicarbazones as dual FAAH-MAGL inhibitors
Jaiswal, Shivani; Ayyannan, Senthil Raja
Phosphorus, Sulfur, and Silicon and the Related Elements (20251-23 doi
 
Ginsenoside F2 inhibits MLCK to induce synthetic lethality in MYC-driven triple-negative breast cancer and pancreatic cancer
Wu, Rui; Lu, Dong; Luan, Xin; Zhang, Weidong; Sun, Zhe
Phytochemistry Letters 67 (2025102949 doi
 
Three new alkaloids from Haplophyllum tuberculatum as competitive type of in-vitro α-glucosidase inhibitors
Rehman, Najeeb Ur; Rafiq, Kashif; Ullah, Saeed; Halim, Sobia Ahsan; Khan, Ajmal; Gibbons, Simon; Csuk, René; Al-Harrasi, Ahmed
Phytochemistry Letters 65 (202594-101 doi
 
Bacopaside I, acting as an aquaporin 1 inhibitor, ameliorates rheumatoid arthritis via suppressing aquaporin 1-mediated autophagy
Huang, Yan; Zhou, Meng-yuan; Li, Ling-ling; Lv, Min; Xu, Ze-shan; Wu, Xin-jie; Gu, Sheng-long; Zhang, Man-yu; Cai, Li; Li, Rong
Phytomedicine 138 (2025156444 doi
 
Design and Synthesis of New Quinazolinone Derivatives Conjugated with Chalcone or Pyridazine Moieties: Anticancer Activities and Apoptotic Induction
Elazab, Dina S. M.; Othman, Dina I. A.; Selim, Khalid B.; Goda, Fatma E.
Polycyclic Aromatic Compounds (20251-24 doi
 
Investigating the Anticancer Activity of Novel 1,2,4-Oxadiazole-Linked 1,2,3-Triazole Moieties via EGFR/pI3K/mTOR Cascade Down-Regulation
Ayoup, Mohammed Salah; Mariam, Ghanem; Hamida, Abdel-Hamid; Ibrahim, Elghamry; M., Abu-Serie Marwa; A., Masoud Aliaa; A., Ghareeb Doaa; F., Harras Marwa; F., Ismail Magda M.; & Negm, Amr
Polycyclic Aromatic Compounds (20251-20 doi
 
Taming interleukin-12: Engineering of bispecific antibody-based IL-12 mimetics with biased agonism capacities
Lipinski, Britta; Unmuth, Laura; Arras, Paul; Endruszeit, Ron; Becker, Stefan; Rödel, Jonathan Mathias; Scheller, Jürgen; Pudewell, Silke; Floss, Doreen M.; Krah, Simon; Harwardt, Julia; Doerner, Achim; Helming, Laura; Xu, Chunxiao; Menrad, Andreas; Evers, Andreas; Kolmar, Harald; Elter, Desislava; Pekar, Lukas; Zielonka, Stefan
Protein Science 34 (3) (2025e70072 doi
 
Restoring adapter protein complex 4 function with small molecules: an in silico approach to spastic paraplegia 50
Francisco, Serena; Lamacchia, Lorenzo; Turco, Attilio; Ermondi, Giuseppe; Caron, Giulia; Rossi Sebastiano, Matteo
Protein Science 34 (1) (2025e70006 doi
 
Design and synthesis of terephthalic dihydrazide analogues as dual inhibitors of glycation and urease
Bilal, Hazrat; Ullah, Saeed; Halim, Sobia Ahsan; Khan, Momin; Avula, Satya Kumar; Alam, Aftab; Zayed, Eman Serry; El-Ghaiesh, Sabah H.; Ogaly, Hanan A.; Shah, Zarbad; Khan, Ajmal; Al-Harrasi, Ahmed
RSC Advances 15 (12) (20259510-9520 doi
 
Exploration of novel triazolo-thiadiazine hybrids of deferasirox as multi-target-directed anti-neuroinflammatory agents with structure–activity relationship (SAR): a new treatment opportunity for Alzheimer's disease
Shakir, Syed Ahmed; Rashid, Umer; Marryum; Fatima, Nighat; Ejaz, Syeda Abida; Fayyaz, Ammara; Ullah, Muhammad Zahid; Saeed, Aamer; Khan, Ajmal; Al Harrasi, Ahmed; Mumtaz, Amara
RSC Advances 15 (1) (2025101-118 doi
 
Dynamic conformational equilibria in the active states of KRAS and NRAS
Rennella, Enrico; Henry, Chrystèle; Dickson, Callum J.; Georgescauld, Florian; Wales, Thomas E.; Erdmann, Dirk; Cotesta, Simona; Maira, Michel; Sedrani, Richard; Brachmann, Saskia M.; Ostermann, Nils; Engen, John R.; Kay, Lewis E.; Beyer, Kim S.; Wilcken, Rainer; Jahnke, Wolfgang
RSC Chemical Biology 6 (1) (2025106-118 doi
 
Development of benzofuran derived sulfamates as dual aromatase-steroid sulfatase inhibitors (DASIs): Design, synthesis and biological evaluation
Eissa, Ahmed G.; Simons, Claire; Gozzi, Francesca; Aloqab, Oqab; Parrish, Charlotte E.; Mohamed, Nadira; Shiali, Irene; Al-Baldawi, Harith; Foster, Paul A.
RSC Medicinal Chemistry (2025doi
 
Dual EGFR and Telomerase Inhibitory Potential of New Triazole Tethered Schiff Bases Endowed with Apoptosis: Design, Synthesis, and Biological Assessments
Zeidan, Mohamed A.; Ashour, Heba F.; Yassen, Asmaa; Abo Elmaaty, Ayman; Farag, Ayman B.; Sharaky, Marwa; Abdullah Alzahrani, Abdullah Yahya; Mughram, Mohammed H. A. L.; Al-Karmalawy, Ahmed A.
RSC Medicinal Chemistry (2025doi
 
Antiproliferative effects, Mechanism of Action and Tumor Reduction Studies in a Lung Cancer Xenograft Mouse Model of an Organometallic Gold(I) Alkynyl Complex
Basu, Uttara; Wilsmann, Anna; Türck, Sebastian; Hoffmeister, Henrik; Schiedel, Matthias; Gasser, Gilles; Ott, Ingo
RSC Medicinal Chemistry (2025doi
 
Probing Non Peptide Agonists Binding at Human Nociceptin/Orphanin FQ Receptor: A Molecular Modelling Study
Gozzi, Matteo; Malfacini, Davide; Albanese, Valentina; Pacifico, Salvatore; Preti, Delia; Guerrini, Remo; Calò, Girolamo; Ciancetta, Antonella
RSC Medicinal Chemistry (2025doi
 
Donepezil-Based Rational Design of N-Substituted Quinazolinthioacetamide Candidates as Potential Acetylcholine Esterase Inhibitors for the Treatment of Alzheimer’s Disease: In vitro and In vivo Studies
Al-Karmalawy, Ahmed A.; Mohamed, Ahmed F.; Shalaby, Heba Nasr; Abo Elmaaty, Ayman; El-Shiekh, Riham A.; Zeidan, Mohamed A.; Alnajjar, Radwan; Abdullah Alzahrani, Abdullah Yahya; Mughram, Mohammed H. A. L.; Shaldam, Moataz Ahmed; Tawfik, Haytham O.
RSC Medicinal Chemistry (2025doi
 
Epitulipinolide diepoxide induces apoptosis in bladder cancer cells by inhibiting the ERK/MAPK signaling pathway and promoting autophagy
Jing, Zhiqiang; Li, Kai; Feng, Shuang; Su, Hao; Yuan, Dongbo; Zhu, Jianguo
Rendiconti Lincei. Scienze Fisiche e Naturali (2025doi
 
Evaluation of peptide secondary structure and intracellular uptake by introducing disubstituted amino acids into the amphipathic helical peptide C18AA
Kato, Takuma; Ofuka, Go; Kobayashi, Ryota; Asano, Akiko; Doi, Mitsunobu
Results in Chemistry 14 (2025102103 doi
 
Counterions influence the isothermal self-assembly of DNA nanostructures
Rodriguez, Arlin; Madhanagopal, Bharath Raj; Sarkar, Kahini; Nowzari, Zohreh; Mathivanan, Johnsi; Talbot, Hannah; Patel, Akul; Morya, Vinod; Halvorsen, Ken; Vangaveti, Sweta; Berglund, J. Andrew; Chandrasekaran, Arun Richard
Science Advances 11 (11) (2025eadu7366 doi
 
In vitro cytotoxicity and secondary metabolites of Talaromyces wortmannii isolated from Arundo donax L.: Identification of a new phytoceramide
Abdel Bar, Fatma M.; Galala, Amal A.; El-Sokkary, Mohamed M.; Khalil, Ashraf T.; Sallam, Amal
Scientific African 27 (2025e02600 doi
 
Investigation on the interaction between catalase and typical phthalates with different side chain lengths
Guan, Rui; Wang, Yaoyao; Liu, Hongbin; Zong, Wansong; Shi, Rongguang; Lan, Jing; Zhao, Xingchen; Zhao, Zongshan
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 336 (2025126031 doi
 
Maintenance of p-eIF2α levels by the eIF2B complex is vital for colorectal cancer
Škapik, Ivana Paskov; Giacomelli, Chiara; Hahn, Sarah; Deinlein, Hanna; Gallant, Peter; Diebold, Mathias; Biayna, Josep; Hendricks, Anne; Olimski, Leon; Otto, Christoph; Kastner, Carolin; Wolf, Elmar; Schülein-Völk, Christina; Maurus, Katja; Rosenwald, Andreas; Schleussner, Nikolai; Jackstadt, Rene-Filip; Schlegel, Nicolas; Germer, Christoph-Thomas; Bushell, Martin; Eilers, Martin; Schmidt, Stefanie; Wiegering, Armin
The EMBO Journal (20251-31-31 doi
 
An FDA-approved drug structurally and phenotypically corrects the K210del mutation in genetic cardiomyopathy models
Wang, Ping; Ahmed, Mahmoud Salama; Nguyen, Ngoc Uyen Nhi; Menendez-Montes, Ivan; Hsu, Ching-Cheng; Farag, Ayman B.; Thet, Suwannee; Lam, Nicholas T.; Wansapura, Janaka P.; Crossley, Eric; Ma, Ning; Zhao, Shane Rui; Zhang, Tiejun; Morimoto, Sachio; Singh, Rohit; Elhelaly, Waleed; Tassin, Tara C.; Cardoso, Alisson C.; Williams, Noelle S.; Pointer, Hayley L.; Elliott, David A.; McNamara, James W.; Watt, Kevin I.; Porrello, Enzo R.; Sadayappan, Sakthivel; Sadek, Hesham A.
The Journal of Clinical Investigation 135 (4) (2025doi
 
C–H Aminoalkylation of 5-Membered Heterocycles: Influence of Descriptors, Data Set Size, and Data Quality on the Predictiveness of Machine Learning Models and Expansion of the Substrate Space Beyond 1,3-Azoles
Felten, Stephanie; He, Cyndi Qixin; Emmert, Marion H.
The Journal of Organic Chemistry (2025doi
 
Multiscale Simulations and Profiling of Human Thymidine Phosphorylase Mutations: Insights into Structural, Dynamics, and Functional Impacts in Mitochondrial Neurogastrointestinal Encephalopathy
Bhagat, Khushboo; Yadav, Amar Jeet; Padhi, Aditya K.
The Journal of Physical Chemistry B (2025doi
 
InterDIA: Interpretable Prediction of Drug-induced Autoimmunity through Ensemble Machine Learning Approaches
Huang, Lina; Liu, Peineng; Huang, Xiaojie
Toxicology (2025154064 doi
 
Analysis of structure phototoxicity relationship towards the de-risking of phototoxic liabilities in early drug discovery
Takai, Takafumi
Toxicology Letters (2025doi
 
A tale of two sugars: O-GlcNAc and O-fucose orchestrate growth, development, and acclimation in plants
Aizezi, Yalikunjiang; Yuan, Yizhong; Xu, Shou-Ling; Wang, Zhi-Yong
Trends in Biochemical Sciences (2025doi
 
Efficient Synthesis using One-Pot Method and In Silico Analysis of Pyridazinone Derivatives as Inhibitor for Aldose Reductase Enzymes
Fatisa, Yuni; Herfindo, Noval; Aisyah, Fadila; Yuda Teruna, Hilwan; Jasril, Jasril; Zamri, Adel; Frimayanti, Neni
Trends in Sciences 22 (4) (20259396 doi
 
Deciphering Depression-Targeted Mechanisms of Pandanus odorifer Leaf Extracts Based on Component Analysis and Integrated Molecular Approaches
Praditapuspa, Ersanda Nurma; Izazi, Farizah; Savitri, Dita; Andayani, Rina; Maulana, Saipul; Pratama, Mohammad Rizki Fadhil; Putra, Masteria Yunovilsa; Ekowati, Juni
Trends in Sciences 22 (4) (20259320 doi
 
Effect of triple-frequency sono-germination and soaking treatments on techno-functional characteristics of barley
Tufail, Tabussam; Ul Ain, Huma Bader; Ashraf, Jawad; Virk, Muhammad Safiullah; Ahmed, Zahoor; Dabbour, Mokhtar; Alsulami, Tawfiq; Althawab, Suleiman; Xu, Bin
Ultrasonics Sonochemistry (2025107231 doi
 
Preclinical evaluation of 68Ga-labeled peptides for targeting CD44 imaging
Pan, Xiaoyu; Liu, Yi; Liu, Xuwei; Zhang, Fengsheng; Bai, Liyan; Xi, Yue; Ji, Mengjing; Xu, Xiaoping; Liu, Fei; Li, Jindian; Song, Shaoli
VIEW n/a (n/a) (202520240081 doi
 
The antioxidant activity of monosubstituted edaravone: Theoretical insights
Vo, Quan V.; Trung, Nguyen Quang; Yen, Tran Thi; Thao, Pham Thi Thu; Thong, Nguyen Minh; Quang, Duong Tuan; Nam, Pham Cam; Huong, Dinh Quy; Mechler, Adam
Vietnam Journal of Chemistry n/a (n/a) (2025doi
 
Rational Proteolysis Targeting Chimera Design Driven by Molecular Modeling and Machine Learning
Tan, Shuoyan; Chen, Zhenglu; Lu, Ruiqiang; Liu, Huanxiang; Yao, Xiaojun
WIREs Computational Molecular Science 15 (2) (2025e70013 doi
 
PROTAC-induced Protein Structural Dynamics in Targeted Protein Degradation
Wu, Kingsley Y.; Hung, Ta I.; Chang, Chia-en A.
eLife Sciences Publications, Ltd (2025doi
 
Pharmacophore Modeling in Drug Design
Ghosh, Rahul; Roy, Sharanya; Rakshit, Gourav; Singh, Nisha Kumari; Maiti, Nigam Jyoti
Computational Methods for Rational Drug Design (2025167-194 doi
 
Design, Synthesis, and Antiproliferative Activity of Novel Indole/1,2,4-Triazole Hybrids as Tubulin Polymerization Inhibitors
Mahmoud, Esraa; Abdelhamid, Dalia; Mohammed, Anber F.; Almarhoon, Zainab M.; Bräse, Stefan; Youssif, Bahaa G. M.; Hayallah, Alaa M.; Abdel-Aziz, Mohamad
Pharmaceuticals 18 (2) (2025doi
 
Scaffold Hopping and De Novo Drug Design
Chakraborty, Shrimanti; Chakraborty, Soumi; Sarkar, Biprajit; Ghosh, Rahul; Roy, Sharanya; Singh, Nisha Kumari; Rakshit, Gourav
Computational Methods for Rational Drug Design (2025195-219 doi
 
(E)-1-(3-(3-Hydroxy-4-Methoxyphenyl)-1-(3,4,5-Trimethoxyphenyl)allyl)-1H-1,2,4-Triazole and Related Compounds: Their Synthesis and Biological Evaluation as Novel Antimitotic Agents Targeting Breast Cancer
Ana, Gloria; Malebari, Azizah M.; Noorani, Sara; Fayne, Darren; O’Boyle, Niamh M.; Zisterer, Daniela M.; Pimentel, Elisangela F.; Endringer, Denise C.; Meegan, Mary J.
Pharmaceuticals 18 (1) (2025doi
 
Py-CoMSIA: An Open-Source Implementation of Comparative Molecular Similarity Indices Analysis in Python
Haga, Christopher L.; Le, Crystal N.; Yang, Xue D.; Phinney, Donald G.
Pharmaceuticals 18 (3) (2025doi
 
Antiprotozoal Aminosteroids from Pachysandra terminalis
Schäfer, Lizanne; Cal, Monica; Kaiser, Marcel; Mäser, Pascal; Schmidt, Thomas J.
Molecules 30 (5) (2025doi
 
Discovery of PD-L1 Peptide Inhibitors from Ascidian Enzymatic Hydrolysates by Affinity Ultrafiltration Coupled to NanoLC-MS/MS
Huang, Qiuyang; Zang, Xiaoling; Jin, Xinyu; Liu, Qian; Zhang, Xin; Li, Xinyu; Zhao, Lizhen; Lv, Zhihua
Marine Drugs 23 (4) (2025doi
 
Bioaggregachromism of Asymmetric Monomethine Cyanine Dyes as Noncovalent Binders for Nucleic Acids
Ilieva, Sonia; Petkov, Nikolay; Gargallo, Raimundo; Novakov, Christo; Rangelov, Miroslav; Todorova, Nadezhda; Vasilev, Aleksey; Cheshmedzhieva, Diana
Biosensors 15 (3) (2025doi
 
Enhanced Intranasal Delivery of Atorvastatin via Superparamagnetic Iron-Oxide-Loaded Nanocarriers: Cytotoxicity and Inflammation Evaluation and In Vivo, In Silico, and Network Pharmacology Study for Targeting Glioblastoma Management
Zarif Attalla, Kristina; Hassan, Doaa H.; Teaima, Mahmoud H.; Yousry, Carol; El-Nabarawi, Mohamed A.; Said, Mohamed A.; Elhabal, Sammar F.
Pharmaceuticals 18 (3) (2025doi
 
Design, Synthesis, and Cytotoxicity Evaluation of Novel Indolin-2-One Based Molecules on Hepatocellular Carcinoma HepG2 Cells as Protein Kinase Inhibitors
Kandeel, Manal M.; AbdElhameid, Mohamed K.; Adel, Mohamed; Al-Shorbagy, Muhammad Y.; Negmeldin, Ahmed T.
Molecules 30 (5) (2025doi
 
Therapeutic Potential of Cajanus cajan (L.) Millsp. Leaf Extract in Modulating Gut Microbiota and Immune Response for the Treatment of Inflammatory Bowel Disease
Lin, Mingzhang; Piao, Linghua; Zhao, Zhendong; Liao, Li; Wang, Dayong; Zhang, Haiwen; Liu, Xiande
Pharmaceuticals 18 (1) (2025doi
 
Molecular Dynamics-Assisted Discovery of Novel Phosphodiesterase-5 Inhibitors Targeting a Unique Allosteric Pocket
Luo, Weihao; Liu, Runduo; Cai, Xinlin; Zhou, Qian; Zhang, Chen
Molecules 30 (3) (2025doi
 
Molecular Dynamics Insights into Peptide-Based Tetrodotoxin Delivery Nanostructures
Song, Shenghan; Xia, Xinyu; Shorty, Temair; Li, Tongtong; Stevens, Amy O.; Zhao, Chao; He, Yi
Molecules 30 (1) (2025doi
 
Targeting MAO-B with Small-Molecule Inhibitors: A Decade of Advances in Anticancer Research (2012–2024)
Alsaad, Iyman; Abdel Rahman, Diana M. A.; Al-Tamimi, Ola; Alhaj, Shayma’a A.; Sabbah, Dima A.; Hajjo, Rima; Bardaweel, Sanaa K.
Molecules 30 (1) (2025doi
 
Synthesis and Application of 4′-C-[(N-alkyl)aminoethyl]thymidine Analogs for Optimizing Oligonucleotide Properties
Fujiki, Kota; Kakisawa, Yuri; Mahmoud, Elsayed M.; Ueno, Yoshihito
Molecules 30 (3) (2025doi
 
Stereoselective Synthesis and Biological Evaluation of Perhydroquinoxaline-Based κ Receptor Agonists
Hoffmann, Jonathan; Schepmann, Dirk; Daniliuc, Constantin; Bermudez, Marcel; Wünsch, Bernhard
International Journal of Molecular Sciences 26 (3) (2025doi
 
Naringenin Decreases Retroperitoneal Adiposity and Improves Metabolic Parameters in a Rat Model of Western Diet-Induced Obesity
López-Almada, Gabriela; Domínguez-Avila, J. A.; Robles-Sánchez, Rosario M.; Arauz-Cabrera, Jonathan; Martínez-Coronilla, Gustavo; González-Aguilar, Gustavo A.; Salazar-López, Norma J.
Metabolites 15 (2) (2025doi
 
Tribulus terrestris Fruit Extract: Bioactive Compounds, ADMET Analysis, and Molecular Docking with Penicillin-Binding Protein 2a Transpeptidase of Methicillin-Resistant Staphylococcus epidermidis
Alzahrani, Khalid J.
Current Issues in Molecular Biology 47 (1) (2025doi
 
Computer-Aided Drug Design in Research on Chinese Materia Medica: Methods, Applications, Advantages, and Challenges
Chen, Ban; Liu, Shuangshuang; Xia, Huiyin; Li, Xican; Zhang, Yingqing
Pharmaceutics 17 (3) (2025doi
 
Multifaceted Sulfonamide-Derived Thiosemicarbazones: Combining Metal Chelation and Carbonic Anhydrases Inhibition in Anticancer Therapy
Martínez-Montiel, Mónica; Arrighi, Giulia; Begines, Paloma; González-Bakker, Aday; Puerta, Adrián; Fernandes, Miguel X.; Merino-Montiel, Penélope; Montiel-Smith, Sara; Nocentini, Alessio; Supuran, Claudiu T.; Padrón, José M.; Fernández-Bolaños, José G.; López, Óscar
International Journal of Molecular Sciences 26 (3) (2025doi
 
Discovery of Novel Antimicrobial-Active Compounds and Their Analogues by In Silico Small Chemical Screening Targeting Staphylococcus aureus MurB
Okubo, Saya; Hirose, Shoki; Aoki, Shunsuke
Molecules 30 (7) (2025doi
 
Structure-Based Identification of SARS-CoV-2 nsp10-16 Methyltransferase Inhibitors Using Molecular Dynamics Insights
Alharbi, Ahmad M.
Current Issues in Molecular Biology 47 (3) (2025doi
 
Synthesis of Pyrazole-Based Inhibitors of the Bacterial Enzyme N-Succinyl-l,l-2,6-Diaminopimelic Acid Desuccinylase (DapE) as Potential Antibiotics
DiPuma, Thomas; Kelley, Emma H.; Thabthimthong, Teerana; Bland, Alayna; Konczak, Katherine; Torma, Katherine J.; Mohammad, Thahani S. Habeeb; Olsen, Kenneth W.; Becker, Daniel P.
International Journal of Molecular Sciences 26 (1) (2025doi
 
Synthesis, Antitumor Activities, and Apoptosis-Inducing Activities of Schiff’s Bases Incorporating Imidazolidine-2,4-dione Scaffold: Molecular Docking Studies and Enzymatic Inhibition Activities
Alanazi, Fhdah S.; Alkahtani, Hamad M.; Abdel-Aziz, Alaa A. M.; El-Azab, Adel S.; Asiri, Hanadi H.; Bakheit, Ahmed H.; Al-Omary, Fatmah A.
Pharmaceuticals 18 (4) (2025doi
 
Virtual Screening and Molecular Dynamics of Cytokine–Drug Complexes for Atherosclerosis Therapy
Rodríguez-Fernández, María A.; Tristán-Flores, Fabiola E.; Casique-Aguirre, Diana; Negrete-Rodríguez, María D.; Cervantes-Montelongo, Juan A.; Conde-Barajas, Eloy; Acosta-García, Gerardo; Silva-Martínez, Guillermo A.
International Journal of Molecular Sciences 26 (7) (2025doi
 
Computer-assisted Methods and Tools for Structure- and Ligand-based Drug Design
Mishra, Saurav Kumar; Roy, Sneha; Chhetri, Tabsum; Georrge, John J.
Computational Methods for Rational Drug Design (202569-95 doi
 
Design, Synthesis, and Biological Evaluation of 5,8-Dimethyl Shikonin Oximes as SARS-CoV-2 Mpro Inhibitors
Cui, Jiahua; Xiang, Shouyan; Zhang, Qijing; Xiao, Shangqing; Yuan, Gaoyang; Liu, Chenwu; Li, Shaoshun
Molecules 30 (6) (2025doi
 
Clinical Features of Families with a Novel Pathogenic Mutation in Sepiapterin Reductase
Mohamed, Feda E.; Alzyoud, Lara; Ghattas, Mohammad A.; Tabouni, Mohammed; Fienemann, André; Trinh, Joanne; Baydoun, Ibrahim; Kizhakkedath, Praseetha; Alblooshi, Hiba; Shaukat, Qudsia; Amouri, Rim; Farrer, Matthew J.; Sassi, Samia B.; Al-Jasmi, Fatma
International Journal of Molecular Sciences 26 (7) (2025doi